adapt for public repo

Author: ChiahsinChu

.github/workflows/ci.yml

@@ -36,21 +36,24 @@ jobs:
 
       - name: Test with pytest
         run: |
-          pytest --cov --junitxml=junit.xml --cov-report=xml
+          pytest --cov=src/ec_mlp tests --junitxml=junit.xml --cov-report=xml
 
       - name: Upload coverage to Codecov
         uses: codecov/codecov-action@v5
         with:
           token: ${{ secrets.CODECOV_TOKEN }}
-          slug: ChiahsinChu/ec-MLP
-          file: ./coverage.xml
+          slug: ${{ github.repository }}
+          files: ./coverage.xml
+          report_type: coverage
 
       - name: Upload test results to Codecov
         if: ${{ !cancelled() }}
-        uses: codecov/test-results-action@v1
+        uses: codecov/codecov-action@v5
         with:
           token: ${{ secrets.CODECOV_TOKEN }}
-          file: ./junit.xml
+          slug: ${{ github.repository }}
+          files: ./junit.xml
+          report_type: test_results
 
       - name: Build documentation
         run: |

README.md

@@ -1,6 +1,6 @@
 # README
 
-[![CI](https://github.com/chenggroup/ec-MLP/actions/workflows/ci.yml/badge.svg?branch=main)](https://github.com/chenggroup/ec-MLP/actions/workflows/ci.yml) [![codecov](https://codecov.io/gh/chenggroup/ec-MLP/graph/badge.svg?token=9PXNT5XB7C)](https://codecov.io/gh/chenggroup/ec-MLP)
+[![CI](https://github.com/chenggroup/ec-MLP/actions/workflows/ci.yml/badge.svg)](https://github.com/chenggroup/ec-MLP/actions/workflows/ci.yml) [![codecov](https://codecov.io/gh/chenggroup/ec-MLP/graph/badge.svg?token=9PXNT5XB7C)](https://codecov.io/gh/chenggroup/ec-MLP)
 
 DeepMD-kit plugin for ElectroChemical interfaces simulations.
 

pyproject.toml

@@ -15,7 +15,7 @@ dynamic = ["version", "readme"]
 description = "ec-MLP: Machine Learning Potential for ElectroChemistry"
 license = { file = ".license-header.txt" }
 dependencies = [
-    "deepmd-kit>=3.0.0",
+    "deepmd-kit>=3.1.1",
     "torch>=2.1.0",
     "torchopt>=0.7.3",
     "numpy>=1.20.0, <2.0",