2022-05-09

Agenda

SARS-CoV-2 is associated with changes in brain structure in UK Biobank
- https://www.nature.com/articles/s41586-022-04569-5
streaming dicom parser in javascript:
- https://github.com/exini/dicom-streams-js
Laurel Bridge Compass
- MGB using it for de-identification
- https://laurelbridge.com/products/compass/
dicom-codecs
- Can this be used by python? Yes probably - need to create bindings to native code or webassembly
- Might be able to use:
  - https://github.com/wasmerio/wasmer-python
- https://wasmer.io/
webgpu python prototype
- memory allocation limits
HTJ2K
- SIIM Tech Talk on HTJ2K
- How to get the correct byte ranges?
  - JF's early prototype
    - Encode in resolution order
    - Put offsets of each resolution as a private tag in DICOM
    - Get first 5K of DICOM P10 file (to read the offsets)
  - JPIP
    - TCP/UDP/HTTP interface
Python in a browser
- https://anaconda.cloud/pyscript-python-in-the-browser
C++ to assembly in a browser:
- https://godbolt.org/
- https://quick-bench.com/#
Open source consrtium to de-identification in medical imaging
- Whole workflow - reports, DICOM