Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Calculate per-base error rates #13

Open
barneypotter24 opened this issue Jun 21, 2017 · 0 comments
Open

Calculate per-base error rates #13

barneypotter24 opened this issue Jun 21, 2017 · 0 comments

Comments

@barneypotter24
Copy link
Contributor

The per_base_error_rate function in pipeline.py is not properly parsing VCF files. This appears to be in part due to improperly walking through the VCF, and in part because incomplete VCF files are being written by nanopolish.
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@barneypotter24