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pr-verify-pull-request.yaml
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# This is a basic workflow to help you get started with Actions
name: Verify Pull Request
# Controls when the action will run.
on:
pull_request:
types: [opened, synchronize, reopened]
workflow_dispatch:
types: trigger-verify-pull-request
# A workflow run is made up of one or more jobs that can run sequentially or in parallel
jobs:
# This workflow contains a single job called "build"
build:
# The type of runner that the job will run on
runs-on: ubuntu-latest
strategy:
matrix:
python: [ "3.10", "3.11", "3.12" ]
# Steps represent a sequence of tasks that will be executed as part of the job
steps:
# Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
- uses: actions/checkout@v2
- uses: actions/setup-python@v2
name: setup python environment
with:
python-version: ${{ matrix.python }}
- name: Install dependencies
run: |
pip install --upgrade pip
pip install poetry
poetry install
- name: Run tests, codespell, and yamllint
run: |
make test_pr
- name: Validate YAML file
run: yamllint -c .yamllint-config src/information_resource_registry/schema/information_resource_registry.yaml
- name: Codespell
uses: codespell-project/actions-codespell@v1
with:
ignore_words_list: amination,ehr,mor,nin,brite,mirgate,BRITE
skip: SEMMEDDB*,semmed*,.idea,.venv,.git,*.pdf,*.svg,context.*