v3.7.1 fixed 3 file passing bugs in makeSomaticScripts.py

litaifang · litaifang · commit 781503d5919b · 2022-01-19T15:35:21.000-08:00
diff --git a/Dockerfiles/somaticseq.base-1.4.dockerfile b/Dockerfiles/somaticseq.base-1.4.dockerfile
@@ -0,0 +1,5 @@
+FROM ubuntu:22.04
+ 
+RUN export DEBIAN_FRONTEND=noninteractive && apt update && apt -y install r-base python3 python3-pip bedtools git wget && apt-get clean
+RUN pip3 install cython pysam numpy scipy pandas xgboost
+RUN R -e "install.packages('ada', repos = 'http://cran.rstudio.com/')"
diff --git a/VERSION b/VERSION
@@ -1 +1 @@
-##SomaticSeq=v3.7.0
+##SomaticSeq=v3.7.1
diff --git a/somaticseq/_version.py b/somaticseq/_version.py
@@ -1,2 +1,2 @@
-__version__ = '3.7.0'
+__version__ = '3.7.1'
 vcf_header = '##SomaticSeq=v{}'.format( __version__ )

Original file line number	Diff line number	Diff line change
`@@ -1,2 +1,2 @@`
`1`		`-__version__ = '3.7.0'`
	`1`	`+__version__ = '3.7.1'`
`2`	`2`	`vcf_header = '##SomaticSeq=v{}'.format( __version__ )`