NAMESPACE

# Generated by roxygen2: do not edit by hand

export(CM)
export(CalTMB)
export(ConvertExtraType)
export(ExGMM)
export(Get_incon_mut)
export(OverLap)
export(assignClass)
export(calMut)
export(count_Mut)
export(fit_model)
export(getBgMRtri)
export(getEnsemblID)
export(getGeneBgProb)
export(getGeneSymbol)
export(getTMBs)
export(get_exomeGene)
export(get_glen)
export(get_zip_pairparam_mle)
export(getsubData)
export(getzero_p)
export(loadfile)
export(mafCleanup)
export(maf_dnp_converter)
export(pred_TMB)
export(readData)
export(remove_outliers)
export(retrieve_context)
export(zipMLE)
exportClasses(MutSet)
import(R6)
importFrom(GenomicRanges,findOverlaps)
importFrom(GenomicRanges,makeGRangesFromDataFrame)
importFrom(MASS,glm.nb)
importFrom(data.table,data.table)
importFrom(data.table,setkey)
importFrom(dplyr,"%>%")
importFrom(dplyr,group_by)
importFrom(dplyr,summarize)
importFrom(limma,alias2Symbol)
importFrom(mixtools,normalmixEM)
importFrom(parallel,mclapply)