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Merge pull request #4 from bcbio/will_changes_docs
Will changes docs
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.DS_Store

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.Rhistory

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.gitignore

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*.Rproj
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.Rhistory

01_quality_assessment/QC.Rmd

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# This code will load from bcbio or nf-core folder
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# NOTE make sure to set numerator and denominator
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coldata <- load_coldata(coldata_fn)
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# Change this line to change the levels to the desired order.
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# Change this line to change the levels to the desired order.
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# It will affect downstream colors in plots.
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coldata[[factor_of_interest]] <- as.factor(coldata[[factor_of_interest]])
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coldata$sample <- row.names(coldata)

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