rp_input.json

{
    "exp": "MATTDATA/expression/IA12Zscore.csv",
    "idmap": "MATTDATA/identifier_mappings.txt",
    "translocations": "MATTDATA/mutations/translocationsIA12.csv",
    "coexpression_dictionary": "MATTRESULT/coexpressionDictionary.json",
    "coexpression_modules": "MATTRESULT/coexpressionModules.json",
    "regulon_modules": "MATTRESULT/regulons.json",
    "mechanistic_output": "MATTRESULT/mechanisticOutput.json",
    "regulon_df": "MATTRESULT/regulonDf.csv",
    "overexpressed_members": "MATTRESULT/overExpressedMembers.csv",
    "underexpressed_members": "MATTRESULT/underExpressedMembers.csv",
    "eigengenes": "MATTRESULT/eigengenes.csv",
    "filtered_causal_results": "MATTRESULT/filteredCausalResults.csv",
    "transcriptional_programs": "MATTRESULT/transcriptional_programs.json",
    "transcriptional_states": "MATTRESULT/transcriptional_states.json",
    "primary_survival_data": "MATTDATA/survival/survivalIA12.csv"
}