Automated Tests for Galaxy on Kubernetes Stacks

Galaxy on GKE deployed via GalaxyKubeMan (AnVIL)

Deployment Testing

Twice a day, GalaxyKubeMan (GKM) is deployed on GKE, mimicking an AnVIL deployment. The purpose of these tests is to provide reasonable confidence that Galaxy is launchable on the AnVIL everyday.

Below is a plot summarizing successful deployments and GKM install times. Click here or on the image for more details.

Tool Testing

After each successful deployment, automated tool tests are also run against the instance. These serve as an end-to-end-like test for Galaxy, providing confidence that Galaxy is not only launchable but functional. These tests cycle on a weekly basis through the entire suite of tools installed by default on AnVIL, providing reasonable confidence that the tools encountered by most users remain functional, and automating the detection and reporting of tools breaking.

Latest tool tests for each chunk:

Chunk ID	Tool List	Latest report	Previous report
0	Toolset	Mon Nov 18 00:55:47 2024	Mon Nov 11 00:52:20 2024
1	Toolset	Mon Nov 18 12:56:07 2024	Mon Nov 11 12:51:44 2024
2	Toolset	Tue Nov 19 00:53:10 2024	Tue Nov 12 00:49:57 2024
3	Toolset	Tue Nov 19 12:53:20 2024	Tue Nov 12 12:52:25 2024
4	Toolset	Wed Nov 20 00:54:04 2024	Wed Nov 13 00:50:41 2024
5	Toolset	Wed Nov 20 12:53:17 2024	Wed Nov 13 12:51:59 2024
6	Toolset	Thu Nov 21 00:52:25 2024	Thu Nov 14 00:51:21 2024
7	Toolset	Thu Nov 21 12:53:57 2024	Thu Nov 14 12:53:29 2024
8	Toolset	Fri Nov 22 00:54:58 2024	Fri Nov 15 00:53:52 2024
9	Toolset	Fri Nov 22 12:53:19 2024	Fri Nov 15 12:52:09 2024
10	Toolset	Sat Nov 23 00:53:29 2024	Sat Nov 16 00:54:56 2024
11	Toolset	Sat Nov 23 12:51:19 2024	Sat Nov 16 12:50:09 2024
12	Toolset	Sun Nov 17 00:56:30 2024	Sun Nov 10 00:53:56 2024
13	Toolset	Sun Nov 17 12:50:04 2024	Sun Nov 10 12:47:53 2024