This folder contains reasult files:
- multiqc_report1.html - the MultiQC report before filtering
- multiqc_report2.html - the MultiQC report after filtering
- SRR064545_coverage.txt - the file with table of coverage per chromosome for sample SRR064545
- SRR064546_coverage.txt - the file with table of coverage per chromosome for sample SRR064546
- SRR064547_coverage.txt - the file with table of coverage per chromosome for sample SRR064547
- SNP.vcf - the VCF file containing all detected SNP variants
- NC_001144.5.recode.vcf - the VCF file containing filtered SNP variants for chromosome 12
- annotated_SNP.txt - the annotation results
- report_images directory - folder with images used in the REPORT.md