Tutorial on building a computing cluster for a bioinformatics lab
I am the Principal Investigator of a bioinformatics lab. In 2010, I built a computing cluster for lab members, and we have been using the cluster ever since. Occasionally some people ask me how I can admin a cluster myself, and I usually point them to the documentation on Rocks cluster. However, the documentation may be overly complicated yet insufficient to solve many of the practical problems that I encountered over the past a few years. Therefore, I decided to write a simple tutorial on building a computing cluster for a bioinformatics lab.
This tutorial is organized into several main sections:
- Hardware
- Installation
- System customization
- User account administration
- Network administration
- SGE administration
- Storage administration
- NFS administration
- Remote management
- Misc Linux configuration
If you have suggestions, comments or additions, please fork the repository, modify it and submit a pull request.
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You are free to fork, copy, modify, distribute, publish or sell information in this tutorial without restrictions. For a formal statement, please refer to http://kai.mit-license.org/.