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SynBioHub2 Docker Setups

General

The docker-compose files in this repository represent various configurations for deploying SynBioHub3. The files can be layered with Docker Compose's multiple file capabilities.

The base configuration, described with docker-compose.yml, is simply SynBioHub3, its graph database Virtuoso, and an autohealer.

To run the base configuration:

  1. Open terminal
  2. git clone https://github.com/synbiohub/synbiohub2-docker
  3. docker-compose -f ./synbiohub2-docker/docker-compose.yml up

With Explorer

To add SBOLExplorer, add the docker-compose.explorer.yml to the main docker-compose, i.e. for step 3 run docker-compose -f ./synbiohub2-docker/docker-compose.yml -f ./synbiohub2-docker/docker-compose.explorer.yml up