This repository is for my G. lucidum bioprocess microbiome analysis project.
Introduction
Ganoderma lucidum is an ecologically and economically important wood-degrading fungus. From a economic perspective, G. lucidum is cultivated for numerous applications, such as medicinal and material. The bioprocess used to grow the fungus--often, a solid-state fermentation--is increasingly understood to harbor a rich microbiome that affects bioprocess outcomes and product characteristics.
This repository contains tools for studying the microbiome of various G. lucidum bioprocesses.
Markup : 1. Zhang B, Yan L, Li Q, Zou J, Tan H, Tan W, Peng W, Li X, Zhang X. Dynamic succession of substrate-associated bacterial composition and function during Ganoderma lucidum growth. PeerJ. 2018 Jun 13;6:e4975. doi: 10.7717/peerj.4975. PMID: 29915697; PMCID: PMC6004108.