From 598c480da0bea8d12bda9d928a20698d5df014a3 Mon Sep 17 00:00:00 2001 From: "E.C. Wood" Date: Wed, 19 Jul 2023 16:29:15 -0700 Subject: [PATCH] #321 update github actions to have right inputs --- .github/workflows/main.yml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml index a21e1163..86c72ac2 100644 --- a/.github/workflows/main.yml +++ b/.github/workflows/main.yml @@ -39,6 +39,6 @@ jobs: run: | cd /home/runner/work/RTX-KG2/RTX-KG2/RTX-KG2 bash -x ./extract-mirbase.sh ~/kg2-build/miRNA.dat - ~/kg2-venv/bin/python3 -u mirbase_dat_to_kg_json.py ~/kg2-build/miRNA.dat ~/kg2-build/kg2-mirbase.json --test - ~/kg2-venv/bin/python3 -u report_stats_on_json_kg.py ~/kg2-build/kg2-mirbase.json ~/kg2-build/kg2-mirbase-report.json + ~/kg2-venv/bin/python3 -u mirbase_dat_to_kg_json.py ~/kg2-build/miRNA.dat ~/kg2-build/kg2-mirbase-nodes.jsonl ~/kg2-build/kg2-mirbase-edges.jsonl --test + ~/kg2-venv/bin/python3 -u report_stats_on_json_kg.py ~/kg2-build/kg2-mirbase-nodes.jsonl ~/kg2-build/kg2-mirbase-edges.jsonl ~/kg2-build/kg2-mirbase-report.json cat ~/kg2-build/kg2-mirbase-report.json \ No newline at end of file