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updated files for release
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cooperl09 committed Sep 25, 2018
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25 changes: 9 additions & 16 deletions po.obo
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format-version: 1.2
data-version: releases/2018-08-14
data-version: releases/2018-09-25
saved-by: cooperl
subsetdef: Angiosperm "Term for angiosperms"
subsetdef: Arabidopsis "Term used for Arabidopsis"
Expand Down Expand Up @@ -6210,7 +6210,7 @@ is_a: PO:0009081 ! higher order inflorescence axis
id: PO:0006322
name: third order inflorescence axis
namespace: plant_anatomy
def: "A higher order inflorescence axis (PO:0009081) that develops from an inflorescence axillary meristem (PO:0009105) of a second order inflorescence axis (PO:0006322)." [POC:Laurel_Cooper, POC:Ramona_Walls] {comment="NYBG:Brandon_Sinn", comment="NYBG:Dario_Cavaliere"}
def: "A higher order inflorescence axis (PO:0009081) that develops from an inflorescence axillary meristem (PO:0009105) of a second order inflorescence axis (PO:0006322)." [POC:Laurel_Cooper, POC:Ramona_Walls] {comment="NYBG:Dario_Cavaliere", comment="NYBG:Brandon_Sinn"}
synonym: "eje de tercero orden de la inflorescencia (Spanish, exact)" EXACT Spanish []
synonym: "second order inflorescence branch (exact)" EXACT []
synonym: "second order paraclade (exact)" EXACT []
Expand Down Expand Up @@ -11115,7 +11115,7 @@ alt_id: PO:0020117
alt_id: PO:0020118
alt_id: PO:0020119
alt_id: PO:0020120
def: "A reproductive shoot system (PO:0025082) that has as parts all of the shoot axes (PO:0025029) and flowers (PO:0009046; must have two or more) distal to the most distal leaf (PO:0009025)." [POC:Laurel_Cooper, POC:Ramona_Walls] {comment="NYBG:Brandon_Sinn", comment="NYBG:Dario_Cavaliere"}
def: "A reproductive shoot system (PO:0025082) that has as parts all of the shoot axes (PO:0025029) and flowers (PO:0009046; must have two or more) distal to the most distal leaf (PO:0009025)." [POC:Laurel_Cooper, POC:Ramona_Walls] {comment="NYBG:Dario_Cavaliere", comment="NYBG:Brandon_Sinn"}
comment: An inflorescence is a reproductive shoot system from which at least two flowers develop. The growth pattern of an inflorescence may be monopodial (single main shoot axis), sympodial (growth only occurs from axillary meristems), or both. An inflorescence axis (PO:0020122) can be determinate or indeterminate. An inflorescence flower pedicel (PO:0009052) is the ultimate axis in an inflorescence. The flower (PO:0009046) of many plants, for example Magnolia spp., is solitary.
subset: Angiosperm
subset: reference
Expand Down Expand Up @@ -11149,7 +11149,7 @@ id: PO:0009052
name: inflorescence flower pedicel
namespace: plant_anatomy
def: "A flower pedicel (PO:0030113) that bears a flower (PO:0009046) in an inflorescence (PO:0009049)." [ISBN:0716710072, NYBG:Brandon_Sinn, NYBG:Dario_Cavaliere, POC:Laurel_Cooper]
comment: An inflorescence flower pedicel is the ultimate shoot axis (PO:0025029) in an inflorescence (PO:0009049). {xref="NYBG:Dario_Cavaliere", xref="NYBG:Brandon_Sinn"}
comment: An inflorescence flower pedicel is the ultimate shoot axis (PO:0025029) in an inflorescence (PO:0009049). {xref="NYBG:Brandon_Sinn", xref="NYBG:Dario_Cavaliere"}
subset: Angiosperm
subset: reference
subset: Tomato
Expand Down Expand Up @@ -13236,7 +13236,7 @@ id: PO:0020122
name: inflorescence axis
namespace: plant_anatomy
def: "A shoot axis (PO:0025029) that is part of an inflorescence (PO:0009049)." [POC:curators]
comment: An inflorescence axis (PO:0020122) has either a determinate apex, which terminates in a flower meristem (PO:0000229), or has an indeterminate apex, which terminates in an inflorescence apical meristem (PO:0009108). An inflorescence pedicel (PO:0009052) is the simplest example of a determinate inflorescence axis. {comment="POC:Laurel_Cooper", xref="NYBG:Dario_Cavaliere", xref="NYBG:Brandon_Sinn"}
comment: An inflorescence axis (PO:0020122) has either a determinate apex, which terminates in a flower meristem (PO:0000229), or has an indeterminate apex, which terminates in an inflorescence apical meristem (PO:0009108). An inflorescence pedicel (PO:0009052) is the simplest example of a determinate inflorescence axis. {xref="NYBG:Brandon_Sinn", comment="POC:Laurel_Cooper", xref="NYBG:Dario_Cavaliere"}
subset: Angiosperm
subset: TraitNet
synonym: "eje de la inflorescencia (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo]
Expand Down Expand Up @@ -15045,7 +15045,7 @@ id: PO:0025104
name: first order inflorescence axis
namespace: plant_anatomy
def: "An inflorescence axis (PO:0020122) that is the primary or main axis of an inflorescence (PO:0009049)." [POC:Ramona_Walls]
comment: Monopodial inflorescences, such as a raceme, have a centrally-located main axis; this axis is a first order inflorescence axis. In contrast, sympodial inflorescences, such as the riphidium, do not have a centrally-located main axis. The basal-most portion of a first order inflorescence axis is referred to as a peduncle (PO:0009053). {xref="NYBG:Dario_Cavaliere", xref="NYBG:Brandon_Sinn"}
comment: Monopodial inflorescences, such as a raceme, have a centrally-located main axis; this axis is a first order inflorescence axis. In contrast, sympodial inflorescences, such as the riphidium, do not have a centrally-located main axis. The basal-most portion of a first order inflorescence axis is referred to as a peduncle (PO:0009053). {xref="NYBG:Brandon_Sinn", xref="NYBG:Dario_Cavaliere"}
subset: Angiosperm
synonym: "inflorescence rachis (exact)" EXACT [FNA:78c2e094-f6db-4d95-b8bb-3e2bdaebf764]
synonym: "inflorescence rhachis (exact)" EXACT [FNA:f76f9272-ef24-4be8-a9b3-3da4c06bd8cf]
Expand All @@ -15063,7 +15063,7 @@ creation_date: 2011-01-05T08:41:49Z
id: PO:0025105
name: fourth order inflorescence axis
namespace: plant_anatomy
def: "A higher order inflorescence axis (PO:0009081) that develops from an inflorescence axillary meristem (PO:0009105) of a third order inflorescence axis (PO:0025105)." [POC:Laurel_Cooper, POC:Ramona_Walls] {comment="NYBG:Brandon_Sinn", comment="NYBG:Dario_Cavaliere"}
def: "A higher order inflorescence axis (PO:0009081) that develops from an inflorescence axillary meristem (PO:0009105) of a third order inflorescence axis (PO:0025105)." [POC:Laurel_Cooper, POC:Ramona_Walls] {comment="NYBG:Dario_Cavaliere", comment="NYBG:Brandon_Sinn"}
synonym: "eje de cuarto orden de la inflorescencia (Spanish, exact)" EXACT Spanish []
synonym: "tertiary inflorescence branch (exact)" EXACT []
synonym: "third order inflorescence branch (exact)" EXACT []
Expand All @@ -15079,7 +15079,7 @@ creation_date: 2011-01-05T08:56:27Z
id: PO:0025106
name: fifth order inflorescence axis
namespace: plant_anatomy
def: "A higher order inflorescence axis (PO:0009081) that develops from an inflorescence axillary meristem (PO:0009105) of a fourth order inflorescence axis (PO:0025106)." [POC:Laurel_Cooper, POC:Ramona_Walls] {comment="NYBG:Brandon_Sinn", comment="NYBG:Dario_Cavaliere"}
def: "A higher order inflorescence axis (PO:0009081) that develops from an inflorescence axillary meristem (PO:0009105) of a fourth order inflorescence axis (PO:0025106)." [POC:Laurel_Cooper, POC:Ramona_Walls] {comment="NYBG:Dario_Cavaliere", comment="NYBG:Brandon_Sinn"}
synonym: "eje de quinto orden de la inflorescencia (Spanish, exact)" EXACT Spanish []
synonym: "fourth order inflorescence branch (exact)" EXACT []
synonym: "第四花序分枝 (Japanese, related)" RELATED [NIG:Yukiko_Yamazaki]
Expand Down Expand Up @@ -18504,8 +18504,8 @@ name: awn
namespace: plant_anatomy
def: "A cardinal organ part that is a slender, more or less straight and stiff, fine-pointed, terminal or subterminal appendage of a glume, lemma, or palea." [FNA:glossary]
comment: Found in a spikelet of Poaceae. Sometimes the awn is a continuation of the bearing structure's central primary vein.
synonym: "arista (exact)" EXACT [FNA:5e6f29b2-6a37-4663-888b-7cb315ef277e]
synonym: "arista (exact)" EXACT [FNA:399ba59a-deb1-4bc9-b7e5-ed2b89700d5c]
synonym: "arista (exact)" EXACT [FNA:5e6f29b2-6a37-4663-888b-7cb315ef277e]
synonym: "arista (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo]
synonym: "bristle (broad)" BROAD [FNA:78121d02-e7db-45eb-b1b7-011d5026beae]
synonym: "seta (related)" RELATED [FNA:c751440c-a7b3-4997-aed8-47f8254fd05f]
Expand Down Expand Up @@ -22253,13 +22253,6 @@ xref: PO_GIT:682
is_a: PO:0025007 ! collective plant organ structure
relationship: part_of PO:0030018 ! gametophore

[Term]
id: PO:0028006
name: stipe
def: "In progress.." []
is_a: PO:0025066 ! stalk
property_value: http://purl.org/dc/elements/1.1/date 2018-04-25T23:29:50Z xsd:dateTime

[Term]
id: PO:0030001
name: chloronema cell
Expand Down
17 changes: 2 additions & 15 deletions po.owl
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Expand Up @@ -11,7 +11,7 @@
xmlns:dc="http://purl.org/dc/elements/1.1/"
xmlns:po="http://purl.obolibrary.org/obo/po#">
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/po.owl">
<owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/po/releases/2018-08-14/po.owl"/>
<owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/po/releases/2018-09-25/po.owl"/>
<owl:imports rdf:resource="http://purl.obolibrary.org/obo/po/imports/ncbitaxon_import.owl"/>
<oboInOwl:treat-xrefs-as-genus-differentia rdf:datatype="http://www.w3.org/2001/XMLSchema#string">CL part_of NCBITaxon:33090</oboInOwl:treat-xrefs-as-genus-differentia>
<oboInOwl:treat-xrefs-as-is_a rdf:datatype="http://www.w3.org/2001/XMLSchema#string">CARO</oboInOwl:treat-xrefs-as-is_a>
Expand Down Expand Up @@ -74831,19 +74831,6 @@ these may not begin or end simultaneously. Not all seeds go through a seed dorma



<!-- http://purl.obolibrary.org/obo/PO_0028006 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/PO_0028006">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PO_0025066"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">In progress..</obo:IAO_0000115>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2018-04-25T23:29:50Z</dc:date>
<oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">plant_ontology</oboInOwl:hasOBONamespace>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PO:0028006</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">stipe</rdfs:label>
</owl:Class>



<!-- http://purl.obolibrary.org/obo/PO_0030001 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/PO_0030001">
Expand Down Expand Up @@ -80818,5 +80805,5 @@ Examples: green ash (Fraxinus pennsylvanicum) and tree-of-heaven (Ailanthus alti



<!-- Generated by the OWL API (version 4.2.6) https://github.com/owlcs/owlapi -->
<!-- Generated by the OWL API (version 1.1.0) https://github.com/owlcs/owlapi -->

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