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Cropper.prepare raises an exception when one rectangle does not overlap the ROI #39

@carlosandujar

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@carlosandujar

Depending on the input, some images might not overlap the largest internal rectangle (see example).

Cropper.prepare raises an exception, but it would be more desirable to just ignore non-overlapping rectangles, or return their indices so that they can be removed as when subsetting to the largest component of the graph.

sample_mask

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