DESCRIPTION

Package: MotrpacRatTraining6moWAT
Type: Package
Title: Helper Functions for the MotrpacRatTraining6moWATData R Package
Version: 1.0.1
Date: 2024-03-07
Authors@R: 
    c(
    person(given = "Tyler", family = "Sagendorf", 
           email = "tyler.sagendorf@pnnl.gov",
           comment = c(ORCID = "0000-0003-1552-4870"),
           role = c("aut", "cre")),
    person(given = "Zhenxin", family = "Hou",
           comment = c(ORCID = "0000-0002-1301-0799",
                       "Provided foundation for run_WGCNA function."),
           role = "ctb"),
    person(given = "Vladislav", family = "Petyuk",
           comment = c(ORCID = "0000-0003-4076-151X",
                       "Provided foundation for limma_full function."),
           role = "ctb")
    )
Description: A collection of functions for the analysis and visualization of  
    the MoTrPAC PASS1B training study rat white adipose tissue (WAT) data, 
    contained in the MotrpacRatTraining6moData R package.
License: MIT + file LICENSE
Encoding: UTF-8
Depends: 
    R (>= 3.5.0),
    Biobase
Imports: 
    BiocFileCache,
    circlize,
    ComplexHeatmap (>= 2.12.0),
    cowplot,
    data.table,
    dplyr,
    dynamicTreeCut,
    edgeR,
    fgsea,
    ggbeeswarm,
    ggplot2,
    ggpubr,
    graphics,
    grDevices,
    grid,
    latex2exp,
    limma,
    msigdbr (>= 7.5.1),
    ontologyIndex,
    patchwork,
    purrr,
    rlang,
    scales,
    statmod,
    stats,
    tibble,
    tools,
    utils,
    WGCNA
RoxygenNote: 7.3.1
Roxygen: list(markdown = TRUE)
URL: 
    https://motrpac.github.io/MotrpacRatTraining6moWAT/, 
    https://github.com/MoTrPAC/MotrpacRatTraining6moWAT/