Merge pull request #19 from LSSTDESC/dylib_fix

Dylib fix

Author: damonge

Makefile.am

@@ -3,6 +3,7 @@ EXTRA_DIST = doc README.md
 lib_LTLIBRARIES = libnmt.la
 libnmt_la_SOURCES = src/utils.c src/flatsky_utils.c src/healpix_extra.c src/nmt_bins.c src/nmt_bins_flat.c src/nmt_field.c src/nmt_field_flat.c src/nmt_mask.c src/nmt_mask_flat.c src/nmt_master.c src/nmt_covar.c src/nmt_master_flat.c src/nmt_covar_flat.c
 libnmt_la_CPPFLAGS = $(OPENMP_CFLAGS) -I./src/
+libnmt_la_LDFLAGS = $(OPENP_CFLAGS) -lfftw3 -lfftw3_omp -lgsl -lgslcblas -lcfitsio -lsharp -lfftpack -lc_utils -lm
 
 include_HEADERS = src/namaster.h
 

Makefile.in

@@ -151,6 +151,9 @@ AM_V_lt = $(am__v_lt_@AM_V@)
 am__v_lt_ = $(am__v_lt_@AM_DEFAULT_V@)
 am__v_lt_0 = --silent
 am__v_lt_1 = 
+libnmt_la_LINK = $(LIBTOOL) $(AM_V_lt) --tag=CC $(AM_LIBTOOLFLAGS) \
+	$(LIBTOOLFLAGS) --mode=link $(CCLD) $(AM_CFLAGS) $(CFLAGS) \
+	$(libnmt_la_LDFLAGS) $(LDFLAGS) -o $@
 PROGRAMS = $(bin_PROGRAMS) $(noinst_PROGRAMS)
 am_namaster_OBJECTS = src/namaster-nmt_main.$(OBJEXT)
 namaster_OBJECTS = $(am_namaster_OBJECTS)
@@ -407,6 +410,7 @@ EXTRA_DIST = doc README.md
 lib_LTLIBRARIES = libnmt.la
 libnmt_la_SOURCES = src/utils.c src/flatsky_utils.c src/healpix_extra.c src/nmt_bins.c src/nmt_bins_flat.c src/nmt_field.c src/nmt_field_flat.c src/nmt_mask.c src/nmt_mask_flat.c src/nmt_master.c src/nmt_covar.c src/nmt_master_flat.c src/nmt_covar_flat.c
 libnmt_la_CPPFLAGS = $(OPENMP_CFLAGS) -I./src/
+libnmt_la_LDFLAGS = $(OPENP_CFLAGS) -lfftw3 -lfftw3_omp -lgsl -lgslcblas -lcfitsio -lsharp -lfftpack -lc_utils -lm
 include_HEADERS = src/namaster.h
 namaster_SOURCES = src/nmt_main.c
 namaster_CPPFLAGS = $(OPENMP_CFLAGS) -I./src/
@@ -536,7 +540,7 @@ src/libnmt_la-nmt_covar_flat.lo: src/$(am__dirstamp) \
 	src/$(DEPDIR)/$(am__dirstamp)
 
 libnmt.la: $(libnmt_la_OBJECTS) $(libnmt_la_DEPENDENCIES) $(EXTRA_libnmt_la_DEPENDENCIES) 
-	$(AM_V_CCLD)$(LINK) -rpath $(libdir) $(libnmt_la_OBJECTS) $(libnmt_la_LIBADD) $(LIBS)
+	$(AM_V_CCLD)$(libnmt_la_LINK) -rpath $(libdir) $(libnmt_la_OBJECTS) $(libnmt_la_LIBADD) $(LIBS)
 install-binPROGRAMS: $(bin_PROGRAMS)
 	@$(NORMAL_INSTALL)
 	@list='$(bin_PROGRAMS)'; test -n "$(bindir)" || list=; \

README.md

@@ -47,7 +47,7 @@ where the optional `--user` flag can be used if you don't have admin privileges.
 
 You can check that the python installation works by running the unit tests:
 ```
-python -m unittest -v
+python -m unittest discover -v
 ```
 Note that the `test` directory, containing all unit tests, also contains all the sample python scripts described in the documentation (see below).