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CSV Data Import in GenomicsDB #227

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drsamibioinfo opened this issue Mar 23, 2019 · 0 comments
Open

CSV Data Import in GenomicsDB #227

drsamibioinfo opened this issue Mar 23, 2019 · 0 comments

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@drsamibioinfo
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I have a CSV file that I have formulated myself as a CSV file containing the following columns per line

1,10583,10583,0|0,0|0,,
2,10611,10611,0|0,0|0,,
3,13302,13302,0|0,0|0,,
4,13327,13327,0|0,0|0,,
5,13957,13957,0|0,0|0,,
6,13980,13980,0|0,0|0,,
7,30923,30923,0|0,0|0,,
8,46402,46402,0|0,0|0,,
9,47190,47190,0|0,0|0,,
10,51476,51476,0|1,0|1,,

What could be the possible callsets and vid_mapping file to successfully run vcf2tiledb to successfully import it into genomicsdb

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