{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":804043690,"defaultBranch":"main","name":"NFHM","ownerLogin":"Human-Augment-Analytics","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2024-05-21T21:05:46.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/169300305?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1726447320.0","currentOid":""},"activityList":{"items":[{"before":"3ebaf1629eddec15ea86f2860fe1461614a89a17","after":"d0c7d51f01168a9cb696cae8c4810438221c8dc7","ref":"refs/heads/main","pushedAt":"2024-09-18T23:08:43.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"vngt45","name":null,"path":"/vngt45","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/170507108?s=80&v=4"},"commit":{"message":"exp trait detection","shortMessageHtmlLink":"exp trait detection"}},{"before":"d1e78351433877d2fb46807a3f9c0211fab32369","after":"3ebaf1629eddec15ea86f2860fe1461614a89a17","ref":"refs/heads/main","pushedAt":"2024-09-18T18:38:35.000Z","pushType":"pr_merge","commitsCount":3,"pusher":{"login":"rdombrovski","name":null,"path":"/rdombrovski","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/9388936?s=80&v=4"},"commit":{"message":"Merge pull request #34 from Human-Augment-Analytics/species-classification\n\nadded jupyter notebook with species classification script for vlm4bio…","shortMessageHtmlLink":"Merge pull request <a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2527304655\" data-permission-text=\"Title is private\" data-url=\"https://github.com/Human-Augment-Analytics/NFHM/issues/34\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/Human-Augment-Analytics/NFHM/pull/34/hovercard\" href=\"https://github.com/Human-Augment-Analytics/NFHM/pull/34\">#34</a> from Human-Augment-Analytics/species-classific…"}},{"before":"a70d6bb31200ff9abd4abe97ccff92502053d98a","after":"76469e47d654fde99f74519560f96298ee645a1f","ref":"refs/heads/species-classification","pushedAt":"2024-09-18T18:38:14.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"rdombrovski","name":null,"path":"/rdombrovski","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/9388936?s=80&v=4"},"commit":{"message":"fixed bugs with .utils import and classification limits","shortMessageHtmlLink":"fixed bugs with .utils import and classification limits"}},{"before":null,"after":"a70d6bb31200ff9abd4abe97ccff92502053d98a","ref":"refs/heads/species-classification","pushedAt":"2024-09-16T00:42:00.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"rdombrovski","name":null,"path":"/rdombrovski","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/9388936?s=80&v=4"},"commit":{"message":"added jupyter notebook with species classification script for vlm4bio dataset","shortMessageHtmlLink":"added jupyter notebook with species classification script for vlm4bio…"}},{"before":"cee3e8da3a185c73aa4950a0f98ccce903566dec","after":"e72a9ad7c4ff3fc434c8398b46bd1b93f1753146","ref":"refs/heads/explore-florence-2","pushedAt":"2024-09-06T20:16:01.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"vngt45","name":null,"path":"/vngt45","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/170507108?s=80&v=4"},"commit":{"message":"update notebook","shortMessageHtmlLink":"update notebook"}},{"before":"6ddbbb7fbe4bae7fca60b02d2654941cfeb754f6","after":"d1e78351433877d2fb46807a3f9c0211fab32369","ref":"refs/heads/main","pushedAt":"2024-09-06T17:37:44.000Z","pushType":"pr_merge","commitsCount":6,"pusher":{"login":"rdombrovski","name":null,"path":"/rdombrovski","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/9388936?s=80&v=4"},"commit":{"message":"Merge pull request #32 from Human-Augment-Analytics/vue-class-refactor\n\nVue class refactor","shortMessageHtmlLink":"Merge pull request <a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2506158212\" data-permission-text=\"Title is private\" data-url=\"https://github.com/Human-Augment-Analytics/NFHM/issues/32\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/Human-Augment-Analytics/NFHM/pull/32/hovercard\" href=\"https://github.com/Human-Augment-Analytics/NFHM/pull/32\">#32</a> from Human-Augment-Analytics/vue-class-refactor"}},{"before":"a34d55283fba6ba13a59f90c5f8bc4ac9a2ab401","after":"f711d5ee45bb792905122ef80d242fe526b8047d","ref":"refs/heads/vue-class-refactor","pushedAt":"2024-09-06T17:37:37.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"rdombrovski","name":null,"path":"/rdombrovski","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/9388936?s=80&v=4"},"commit":{"message":"Merge branch 'main' into vue-class-refactor","shortMessageHtmlLink":"Merge branch 'main' into vue-class-refactor"}},{"before":null,"after":"cee3e8da3a185c73aa4950a0f98ccce903566dec","ref":"refs/heads/explore-florence-2","pushedAt":"2024-09-06T17:35:58.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"vngt45","name":null,"path":"/vngt45","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/170507108?s=80&v=4"},"commit":{"message":"explore pretrained florence 2 with sample image","shortMessageHtmlLink":"explore pretrained florence 2 with sample image"}},{"before":"cc30b19df827801a60184d5ed0d077d82c2a802b","after":null,"ref":"refs/heads/refactor/more-pre-deploy-code-improvements","pushedAt":"2024-09-06T15:11:22.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"deatheragetr","name":"Thomas","path":"/deatheragetr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3391824?s=80&v=4"}},{"before":"4931f98d81e60eb8fe108532c6e490a34cfa6f07","after":"6ddbbb7fbe4bae7fca60b02d2654941cfeb754f6","ref":"refs/heads/main","pushedAt":"2024-09-06T15:11:18.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"deatheragetr","name":"Thomas","path":"/deatheragetr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3391824?s=80&v=4"},"commit":{"message":"Refactor/more pre deploy code improvements (#31)\n\n* Type checking and code quality improvements\r\n\r\n* Backend API improvements for robustness: 1) Async Postgres 2) Connection Pool to Postgres 3) Better error handling 4) Better logging 5) Use FastAPI to define the response model for better swagger docs 6) Type checking/hinting improvements where possible\r\n\r\n* Update docker-compose to pass env vars to backend api.  Primarily for open_clip settings.  Update vector embedder job to check for cuda (not able to manually test however)\r\n\r\n* Add a quick bash script to run idigbio ingestor a la Roman's changes\r\n\r\n* Update Readme","shortMessageHtmlLink":"Refactor/more pre deploy code improvements (<a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2498040749\" data-permission-text=\"Title is private\" data-url=\"https://github.com/Human-Augment-Analytics/NFHM/issues/31\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/Human-Augment-Analytics/NFHM/pull/31/hovercard\" href=\"https://github.com/Human-Augment-Analytics/NFHM/pull/31\">#31</a>)"}},{"before":"a7b62a6d78c1f72e805367a492a866f994e4588f","after":"a34d55283fba6ba13a59f90c5f8bc4ac9a2ab401","ref":"refs/heads/vue-class-refactor","pushedAt":"2024-09-05T13:05:44.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"rdombrovski","name":null,"path":"/rdombrovski","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/9388936?s=80&v=4"},"commit":{"message":"test","shortMessageHtmlLink":"test"}},{"before":"5dd75ddea0e723c3ab869ab22d2a81afff9d3ae4","after":"a7b62a6d78c1f72e805367a492a866f994e4588f","ref":"refs/heads/vue-class-refactor","pushedAt":"2024-09-04T20:24:48.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"rdombrovski","name":null,"path":"/rdombrovski","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/9388936?s=80&v=4"},"commit":{"message":"updated readme to include ingestor scripts","shortMessageHtmlLink":"updated readme to include ingestor scripts"}},{"before":"5dfea3918f3b87ba9b7a0d884831aecf90e60f8f","after":"5dd75ddea0e723c3ab869ab22d2a81afff9d3ae4","ref":"refs/heads/vue-class-refactor","pushedAt":"2024-09-04T19:51:53.000Z","pushType":"push","commitsCount":5,"pusher":{"login":"rdombrovski","name":null,"path":"/rdombrovski","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/9388936?s=80&v=4"},"commit":{"message":"Merge remote-tracking branch 'origin' into vue-class-refactor","shortMessageHtmlLink":"Merge remote-tracking branch 'origin' into vue-class-refactor"}},{"before":"4d928ede102327389145d2614ee7c0d1d8875e8a","after":"5dfea3918f3b87ba9b7a0d884831aecf90e60f8f","ref":"refs/heads/vue-class-refactor","pushedAt":"2024-09-04T19:51:32.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"rdombrovski","name":null,"path":"/rdombrovski","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/9388936?s=80&v=4"},"commit":{"message":"fixed frontend bugs on results display; added more startup scripts; standardized interpreter on scripts","shortMessageHtmlLink":"fixed frontend bugs on results display; added more startup scripts; s…"}},{"before":"a7ab3a05a392b77628137e41dd1e5ee55785279a","after":"4931f98d81e60eb8fe108532c6e490a34cfa6f07","ref":"refs/heads/main","pushedAt":"2024-08-30T21:17:51.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"rdombrovski","name":null,"path":"/rdombrovski","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/9388936?s=80&v=4"},"commit":{"message":"Merge pull request #30 from Human-Augment-Analytics/vue-class-refactor\n\nrefactored frontend into components, vue/js modules","shortMessageHtmlLink":"Merge pull request <a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2497566749\" data-permission-text=\"Title is private\" data-url=\"https://github.com/Human-Augment-Analytics/NFHM/issues/30\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/Human-Augment-Analytics/NFHM/pull/30/hovercard\" href=\"https://github.com/Human-Augment-Analytics/NFHM/pull/30\">#30</a> from Human-Augment-Analytics/vue-class-refactor"}},{"before":"fc26e68564a20566f8d9d94f19c6b82b7f5d5884","after":"cc30b19df827801a60184d5ed0d077d82c2a802b","ref":"refs/heads/refactor/more-pre-deploy-code-improvements","pushedAt":"2024-08-30T19:19:57.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"deatheragetr","name":"Thomas","path":"/deatheragetr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3391824?s=80&v=4"},"commit":{"message":"Update Readme","shortMessageHtmlLink":"Update Readme"}},{"before":"7aed00a9ebb7d2056dc1e6b614e2d805a50964ef","after":"fc26e68564a20566f8d9d94f19c6b82b7f5d5884","ref":"refs/heads/refactor/more-pre-deploy-code-improvements","pushedAt":"2024-08-30T19:13:42.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"deatheragetr","name":"Thomas","path":"/deatheragetr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3391824?s=80&v=4"},"commit":{"message":"Add a quick bash script to run idigbio ingestor a la Roman's changes","shortMessageHtmlLink":"Add a quick bash script to run idigbio ingestor a la Roman's changes"}},{"before":null,"after":"7aed00a9ebb7d2056dc1e6b614e2d805a50964ef","ref":"refs/heads/refactor/more-pre-deploy-code-improvements","pushedAt":"2024-08-30T18:53:08.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"deatheragetr","name":"Thomas","path":"/deatheragetr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3391824?s=80&v=4"},"commit":{"message":"Backend API improvements for robustness: 1) Async Postgres 2) Connection Pool to Postgres 3) Better error handling 4) Better logging 5) Use FastAPI to define the response model for better swagger docs 6) Type checking/hinting improvements where possible","shortMessageHtmlLink":"Backend API improvements for robustness: 1) Async Postgres 2) Connect…"}},{"before":"8765eefd72e3bcd69633df094046c1b5445a2b3c","after":null,"ref":"refs/heads/quickfix/readme","pushedAt":"2024-08-30T15:57:53.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"deatheragetr","name":"Thomas","path":"/deatheragetr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3391824?s=80&v=4"}},{"before":"fe5e6df94769e95bb76f09701dcf3656641113ba","after":"a7ab3a05a392b77628137e41dd1e5ee55785279a","ref":"refs/heads/main","pushedAt":"2024-08-30T15:57:50.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"deatheragetr","name":"Thomas","path":"/deatheragetr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3391824?s=80&v=4"},"commit":{"message":"Quickfix/readme (#22)\n\n* Cleanup\r\n\r\n* remove extranous parens","shortMessageHtmlLink":"Quickfix/readme (<a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2432766869\" data-permission-text=\"Title is private\" data-url=\"https://github.com/Human-Augment-Analytics/NFHM/issues/22\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/Human-Augment-Analytics/NFHM/pull/22/hovercard\" href=\"https://github.com/Human-Augment-Analytics/NFHM/pull/22\">#22</a>)"}},{"before":"1676ca40bd9d7a6d91406129ead99fe39049956b","after":null,"ref":"refs/heads/refactor/td-refactor-workers","pushedAt":"2024-08-30T15:57:06.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"deatheragetr","name":"Thomas","path":"/deatheragetr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3391824?s=80&v=4"}},{"before":"75574036986b0b3b39ef025cf70f7324c2ebeb1f","after":"fe5e6df94769e95bb76f09701dcf3656641113ba","ref":"refs/heads/main","pushedAt":"2024-08-30T15:57:03.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"deatheragetr","name":"Thomas","path":"/deatheragetr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3391824?s=80&v=4"},"commit":{"message":"Multiple improvemtns to the idigbio, vector embedder and inputs and postgres output function: 1) Improved and more comprehensive type hinting; Less noisy logs; better error handling; retries on failure (#28)","shortMessageHtmlLink":"Multiple improvemtns to the idigbio, vector embedder and inputs and p…"}},{"before":null,"after":"4d928ede102327389145d2614ee7c0d1d8875e8a","ref":"refs/heads/vue-class-refactor","pushedAt":"2024-08-30T15:37:54.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"rdombrovski","name":null,"path":"/rdombrovski","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/9388936?s=80&v=4"},"commit":{"message":"refactored frontend into components, vue/js modules","shortMessageHtmlLink":"refactored frontend into components, vue/js modules"}},{"before":"2e8f25f551cbdedb515521b1aeaa51f4efa7e024","after":"75574036986b0b3b39ef025cf70f7324c2ebeb1f","ref":"refs/heads/main","pushedAt":"2024-08-27T14:01:38.000Z","pushType":"pr_merge","commitsCount":4,"pusher":{"login":"rdombrovski","name":null,"path":"/rdombrovski","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/9388936?s=80&v=4"},"commit":{"message":"Merge pull request #29 from Human-Augment-Analytics/app-startup-changes\n\nApp startup changes","shortMessageHtmlLink":"Merge pull request <a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2488138648\" data-permission-text=\"Title is private\" data-url=\"https://github.com/Human-Augment-Analytics/NFHM/issues/29\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/Human-Augment-Analytics/NFHM/pull/29/hovercard\" href=\"https://github.com/Human-Augment-Analytics/NFHM/pull/29\">#29</a> from Human-Augment-Analytics/app-startup-changes"}},{"before":"620ef7ab5d380e45e180175c4adf5c2494604c12","after":"17e34846f37222876e01a59511637e9f0ca7bf9d","ref":"refs/heads/app-startup-changes","pushedAt":"2024-08-27T01:59:29.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"rdombrovski","name":null,"path":"/rdombrovski","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/9388936?s=80&v=4"},"commit":{"message":"fixed postgres container startup","shortMessageHtmlLink":"fixed postgres container startup"}},{"before":null,"after":"620ef7ab5d380e45e180175c4adf5c2494604c12","ref":"refs/heads/app-startup-changes","pushedAt":"2024-08-26T19:11:03.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"rdombrovski","name":null,"path":"/rdombrovski","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/9388936?s=80&v=4"},"commit":{"message":"created scripts for ingest workers","shortMessageHtmlLink":"created scripts for ingest workers"}},{"before":null,"after":"1676ca40bd9d7a6d91406129ead99fe39049956b","ref":"refs/heads/refactor/td-refactor-workers","pushedAt":"2024-08-23T17:06:40.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"deatheragetr","name":"Thomas","path":"/deatheragetr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3391824?s=80&v=4"},"commit":{"message":"Multiple improvemtns to the idigbio, vector embedder and inputs and postgres output function: 1) Improved and more comprehensive type hinting; Less noisy logs; better error handling; retries on failure","shortMessageHtmlLink":"Multiple improvemtns to the idigbio, vector embedder and inputs and p…"}},{"before":null,"after":"8765eefd72e3bcd69633df094046c1b5445a2b3c","ref":"refs/heads/quickfix/readme","pushedAt":"2024-07-26T18:22:35.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"deatheragetr","name":"Thomas","path":"/deatheragetr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3391824?s=80&v=4"},"commit":{"message":"remove extranous parens","shortMessageHtmlLink":"remove extranous parens"}},{"before":"a566c8c1158e85e24e68338708d2aac98b10193e","after":"2e8f25f551cbdedb515521b1aeaa51f4efa7e024","ref":"refs/heads/main","pushedAt":"2024-07-26T17:29:15.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"deatheragetr","name":"Thomas","path":"/deatheragetr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3391824?s=80&v=4"},"commit":{"message":"Better BioComos example image; hoist to top of Readme","shortMessageHtmlLink":"Better BioComos example image; hoist to top of Readme"}},{"before":"32489cea6966d6f2401033ae201e335aa7e5ff1c","after":null,"ref":"refs/heads/tdeatherage/connect-backend-api-with-postgres","pushedAt":"2024-07-26T17:17:44.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"deatheragetr","name":"Thomas","path":"/deatheragetr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3391824?s=80&v=4"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEuj0cpgA","startCursor":null,"endCursor":null}},"title":"Activity · Human-Augment-Analytics/NFHM"}