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NAMESPACE
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# Generated by roxygen2: do not edit by hand
S3method(add_colors,DotBracket)
export("dotbracket<-")
export(DB)
export(DBDF)
export(DBDFL)
export(DBS)
export(DBSL)
export(DOTBRACKET_ALPHABET)
export(DOTBRACKET_CHAR_VALUES)
export(DotBracketDataFrame)
export(DotBracketDataFrameList)
export(DotBracketString)
export(DotBracketStringSet)
export(DotBracketStringSetList)
export(LoopIndexList)
export(SDBDFL)
export(STRUCTURE_CLOSE_CHR)
export(STRUCTURE_NEUTRAL_CHR)
export(STRUCTURE_OPEN_CHR)
export(SplitDotBracketDataFrameList)
export(StructuredRNAStringSet)
export(convertAnnotation)
export(dotbracket)
export(getBasePairing)
export(getDotBracket)
export(getLoopIndices)
export(readDotBracketStringSet)
export(readStructuredRNAStringSet)
export(saveDotBracketStringSet)
export(writeDotBracketStringSet)
export(writeStructuredXStringSet)
exportClasses(CompressedSplitDotBracketDFrameList)
exportClasses(CompressedSplitDotBracketDataFrameList)
exportClasses(DotBracketDFrame)
exportClasses(DotBracketDFrameList)
exportClasses(DotBracketDataFrame)
exportClasses(DotBracketDataFrameList)
exportClasses(DotBracketString)
exportClasses(DotBracketStringSet)
exportClasses(DotBracketStringSetList)
exportClasses(LoopIndexList)
exportClasses(SimpleSplitDotBracketDFrameList)
exportClasses(SimpleSplitDotBracketDataFrameList)
exportClasses(StructuredRNAStringSet)
exportMethods("[<-")
exportMethods("colnames<-")
exportMethods("dotbracket<-")
exportMethods("subseq<-")
exportMethods(alphabet)
exportMethods(convertAnnotation)
exportMethods(dotbracket)
exportMethods(encoding)
exportMethods(getBasePairing)
exportMethods(getDotBracket)
exportMethods(getLoopIndices)
exportMethods(seqtype)
exportMethods(subseq)
import(BiocGenerics)
import(Biostrings)
import(IRanges)
import(S4Vectors)
import(methods)
importFrom(XVector,xvcopy)
importFrom(crayon,inverse)
importFrom(crayon,make_style)
importFrom(grDevices,rgb)
importFrom(stringi,stri_locate_all_regex)
importFrom(stringr,str_locate)
importFrom(stringr,str_locate_all)
useDynLib(Structstrings)