From 1eeb20f210cc22d8edfcc4715206a1f4d617d7df Mon Sep 17 00:00:00 2001 From: Nuno Agostinho Date: Tue, 20 Aug 2024 15:53:31 +0100 Subject: [PATCH] Export VEP plugins --- docker/Dockerfile | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docker/Dockerfile b/docker/Dockerfile index 37f6e74f0..b2c91126c 100644 --- a/docker/Dockerfile +++ b/docker/Dockerfile @@ -110,7 +110,7 @@ RUN apt-get update && apt-get -y install \ # Setup VEP environment ENV OPT=/opt/vep ENV OPT_SRC=$OPT/src -ENV PERL5LIB_TMP=$PERL5LIB:$OPT_SRC/ensembl-vep:$OPT_SRC/ensembl-vep/modules +ENV PERL5LIB_TMP=$PERL5LIB:$OPT_SRC/ensembl-vep:$OPT_SRC/ensembl-vep/modules:/plugins ENV PERL5LIB=$PERL5LIB_TMP:$OPT_SRC/bioperl-live ENV KENT_SRC=$OPT/src/kent-335_base/src ENV HTSLIB_DIR=$OPT_SRC/htslib