diff --git a/INSTALL.pl b/INSTALL.pl index 19a30a046..a6cf921bb 100755 --- a/INSTALL.pl +++ b/INSTALL.pl @@ -3,7 +3,7 @@ =head1 LICENSE Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/LICENSE b/LICENSE index 133ef2803..7a452f597 100644 --- a/LICENSE +++ b/LICENSE @@ -187,7 +187,7 @@ identification within third-party archives. Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute - Copyright [2016-2023] EMBL-European Bioinformatics Institute + Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/convert_cache.pl b/convert_cache.pl index dc1859b62..192d81b17 100755 --- a/convert_cache.pl +++ b/convert_cache.pl @@ -1,6 +1,6 @@ #!/usr/bin/env perl # Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/filter_vep b/filter_vep index c8117fb2c..87ceac402 100755 --- a/filter_vep +++ b/filter_vep @@ -3,7 +3,7 @@ =head1 LICENSE Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/haplo b/haplo index 5d74d5b40..20a013828 100755 --- a/haplo +++ b/haplo @@ -1,5 +1,5 @@ #!/usr/bin/env perl -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/AnnotationSource.pm b/modules/Bio/EnsEMBL/VEP/AnnotationSource.pm index a5a5b737e..a3da7cb6a 100644 --- a/modules/Bio/EnsEMBL/VEP/AnnotationSource.pm +++ b/modules/Bio/EnsEMBL/VEP/AnnotationSource.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/AnnotationSource/Cache.pm b/modules/Bio/EnsEMBL/VEP/AnnotationSource/Cache.pm index f156d2393..49b262551 100644 --- a/modules/Bio/EnsEMBL/VEP/AnnotationSource/Cache.pm +++ b/modules/Bio/EnsEMBL/VEP/AnnotationSource/Cache.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/AnnotationSource/Cache/BaseCacheVariation.pm b/modules/Bio/EnsEMBL/VEP/AnnotationSource/Cache/BaseCacheVariation.pm index 01f9849d4..5ae8d3257 100644 --- a/modules/Bio/EnsEMBL/VEP/AnnotationSource/Cache/BaseCacheVariation.pm +++ b/modules/Bio/EnsEMBL/VEP/AnnotationSource/Cache/BaseCacheVariation.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/AnnotationSource/Cache/BaseSerialized.pm b/modules/Bio/EnsEMBL/VEP/AnnotationSource/Cache/BaseSerialized.pm index caefa4de7..5c926af88 100644 --- a/modules/Bio/EnsEMBL/VEP/AnnotationSource/Cache/BaseSerialized.pm +++ b/modules/Bio/EnsEMBL/VEP/AnnotationSource/Cache/BaseSerialized.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/AnnotationSource/Cache/RegFeat.pm b/modules/Bio/EnsEMBL/VEP/AnnotationSource/Cache/RegFeat.pm index a5e0eaaa5..837f65980 100644 --- a/modules/Bio/EnsEMBL/VEP/AnnotationSource/Cache/RegFeat.pm +++ b/modules/Bio/EnsEMBL/VEP/AnnotationSource/Cache/RegFeat.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/AnnotationSource/Cache/Transcript.pm b/modules/Bio/EnsEMBL/VEP/AnnotationSource/Cache/Transcript.pm index 80e164aa4..e3b349f80 100644 --- a/modules/Bio/EnsEMBL/VEP/AnnotationSource/Cache/Transcript.pm +++ b/modules/Bio/EnsEMBL/VEP/AnnotationSource/Cache/Transcript.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/AnnotationSource/Cache/Variation.pm b/modules/Bio/EnsEMBL/VEP/AnnotationSource/Cache/Variation.pm index 02c3be7ce..71bbca96c 100644 --- a/modules/Bio/EnsEMBL/VEP/AnnotationSource/Cache/Variation.pm +++ b/modules/Bio/EnsEMBL/VEP/AnnotationSource/Cache/Variation.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/AnnotationSource/Cache/VariationTabix.pm b/modules/Bio/EnsEMBL/VEP/AnnotationSource/Cache/VariationTabix.pm index d456a40df..7fb34262c 100644 --- a/modules/Bio/EnsEMBL/VEP/AnnotationSource/Cache/VariationTabix.pm +++ b/modules/Bio/EnsEMBL/VEP/AnnotationSource/Cache/VariationTabix.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/AnnotationSource/Database.pm b/modules/Bio/EnsEMBL/VEP/AnnotationSource/Database.pm index 440632600..24f862c0f 100644 --- a/modules/Bio/EnsEMBL/VEP/AnnotationSource/Database.pm +++ b/modules/Bio/EnsEMBL/VEP/AnnotationSource/Database.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/AnnotationSource/Database/RegFeat.pm b/modules/Bio/EnsEMBL/VEP/AnnotationSource/Database/RegFeat.pm index 925c140ae..47e18d33e 100644 --- a/modules/Bio/EnsEMBL/VEP/AnnotationSource/Database/RegFeat.pm +++ b/modules/Bio/EnsEMBL/VEP/AnnotationSource/Database/RegFeat.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/AnnotationSource/Database/StructuralVariation.pm b/modules/Bio/EnsEMBL/VEP/AnnotationSource/Database/StructuralVariation.pm index 47887c417..174611b2d 100644 --- a/modules/Bio/EnsEMBL/VEP/AnnotationSource/Database/StructuralVariation.pm +++ b/modules/Bio/EnsEMBL/VEP/AnnotationSource/Database/StructuralVariation.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/AnnotationSource/Database/Transcript.pm b/modules/Bio/EnsEMBL/VEP/AnnotationSource/Database/Transcript.pm index 7992846be..c4b99c013 100755 --- a/modules/Bio/EnsEMBL/VEP/AnnotationSource/Database/Transcript.pm +++ b/modules/Bio/EnsEMBL/VEP/AnnotationSource/Database/Transcript.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/AnnotationSource/Database/Variation.pm b/modules/Bio/EnsEMBL/VEP/AnnotationSource/Database/Variation.pm index 669f4ced6..ee6b2d307 100644 --- a/modules/Bio/EnsEMBL/VEP/AnnotationSource/Database/Variation.pm +++ b/modules/Bio/EnsEMBL/VEP/AnnotationSource/Database/Variation.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/AnnotationSource/File.pm b/modules/Bio/EnsEMBL/VEP/AnnotationSource/File.pm index 6ada16f38..48dfe0f60 100644 --- a/modules/Bio/EnsEMBL/VEP/AnnotationSource/File.pm +++ b/modules/Bio/EnsEMBL/VEP/AnnotationSource/File.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/AnnotationSource/File/BED.pm b/modules/Bio/EnsEMBL/VEP/AnnotationSource/File/BED.pm index 139193ea8..57c60a806 100644 --- a/modules/Bio/EnsEMBL/VEP/AnnotationSource/File/BED.pm +++ b/modules/Bio/EnsEMBL/VEP/AnnotationSource/File/BED.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/AnnotationSource/File/BaseGXF.pm b/modules/Bio/EnsEMBL/VEP/AnnotationSource/File/BaseGXF.pm index 2178d8051..efd8f45de 100644 --- a/modules/Bio/EnsEMBL/VEP/AnnotationSource/File/BaseGXF.pm +++ b/modules/Bio/EnsEMBL/VEP/AnnotationSource/File/BaseGXF.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/AnnotationSource/File/BigWig.pm b/modules/Bio/EnsEMBL/VEP/AnnotationSource/File/BigWig.pm index 81fabd9e0..e737a32fe 100644 --- a/modules/Bio/EnsEMBL/VEP/AnnotationSource/File/BigWig.pm +++ b/modules/Bio/EnsEMBL/VEP/AnnotationSource/File/BigWig.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/AnnotationSource/File/GFF.pm b/modules/Bio/EnsEMBL/VEP/AnnotationSource/File/GFF.pm index 72065379a..34dd82bdd 100644 --- a/modules/Bio/EnsEMBL/VEP/AnnotationSource/File/GFF.pm +++ b/modules/Bio/EnsEMBL/VEP/AnnotationSource/File/GFF.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/AnnotationSource/File/GTF.pm b/modules/Bio/EnsEMBL/VEP/AnnotationSource/File/GTF.pm index 2971a1ddb..36fc11864 100644 --- a/modules/Bio/EnsEMBL/VEP/AnnotationSource/File/GTF.pm +++ b/modules/Bio/EnsEMBL/VEP/AnnotationSource/File/GTF.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/AnnotationSource/File/VCF.pm b/modules/Bio/EnsEMBL/VEP/AnnotationSource/File/VCF.pm index c4d296641..b9fd42678 100644 --- a/modules/Bio/EnsEMBL/VEP/AnnotationSource/File/VCF.pm +++ b/modules/Bio/EnsEMBL/VEP/AnnotationSource/File/VCF.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/AnnotationSourceAdaptor.pm b/modules/Bio/EnsEMBL/VEP/AnnotationSourceAdaptor.pm index aa3f5819f..8d19fa647 100644 --- a/modules/Bio/EnsEMBL/VEP/AnnotationSourceAdaptor.pm +++ b/modules/Bio/EnsEMBL/VEP/AnnotationSourceAdaptor.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/AnnotationType/RegFeat.pm b/modules/Bio/EnsEMBL/VEP/AnnotationType/RegFeat.pm index 9781e7347..565469ca9 100644 --- a/modules/Bio/EnsEMBL/VEP/AnnotationType/RegFeat.pm +++ b/modules/Bio/EnsEMBL/VEP/AnnotationType/RegFeat.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/AnnotationType/Transcript.pm b/modules/Bio/EnsEMBL/VEP/AnnotationType/Transcript.pm index ad0fb00ea..57a1f87f1 100644 --- a/modules/Bio/EnsEMBL/VEP/AnnotationType/Transcript.pm +++ b/modules/Bio/EnsEMBL/VEP/AnnotationType/Transcript.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/AnnotationType/Variation.pm b/modules/Bio/EnsEMBL/VEP/AnnotationType/Variation.pm index ad8d5c07a..d07f7bb94 100644 --- a/modules/Bio/EnsEMBL/VEP/AnnotationType/Variation.pm +++ b/modules/Bio/EnsEMBL/VEP/AnnotationType/Variation.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/BaseRunner.pm b/modules/Bio/EnsEMBL/VEP/BaseRunner.pm index 85be449d5..9f2fac3e9 100644 --- a/modules/Bio/EnsEMBL/VEP/BaseRunner.pm +++ b/modules/Bio/EnsEMBL/VEP/BaseRunner.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/BaseVEP.pm b/modules/Bio/EnsEMBL/VEP/BaseVEP.pm index 99eb6d91b..ce634230c 100644 --- a/modules/Bio/EnsEMBL/VEP/BaseVEP.pm +++ b/modules/Bio/EnsEMBL/VEP/BaseVEP.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/CacheDir.pm b/modules/Bio/EnsEMBL/VEP/CacheDir.pm index a174f8bf2..3b49aac48 100644 --- a/modules/Bio/EnsEMBL/VEP/CacheDir.pm +++ b/modules/Bio/EnsEMBL/VEP/CacheDir.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/Config.pm b/modules/Bio/EnsEMBL/VEP/Config.pm index a102e4da2..b826d35bd 100755 --- a/modules/Bio/EnsEMBL/VEP/Config.pm +++ b/modules/Bio/EnsEMBL/VEP/Config.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/Constants.pm b/modules/Bio/EnsEMBL/VEP/Constants.pm index 19a838e72..5b76248ea 100755 --- a/modules/Bio/EnsEMBL/VEP/Constants.pm +++ b/modules/Bio/EnsEMBL/VEP/Constants.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/FilterSet.pm b/modules/Bio/EnsEMBL/VEP/FilterSet.pm index 693cd3031..3675108bd 100644 --- a/modules/Bio/EnsEMBL/VEP/FilterSet.pm +++ b/modules/Bio/EnsEMBL/VEP/FilterSet.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/Haplo/AnnotationSource/Cache/Transcript.pm b/modules/Bio/EnsEMBL/VEP/Haplo/AnnotationSource/Cache/Transcript.pm index cc549e871..dd7898957 100644 --- a/modules/Bio/EnsEMBL/VEP/Haplo/AnnotationSource/Cache/Transcript.pm +++ b/modules/Bio/EnsEMBL/VEP/Haplo/AnnotationSource/Cache/Transcript.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/Haplo/AnnotationSource/Database/Transcript.pm b/modules/Bio/EnsEMBL/VEP/Haplo/AnnotationSource/Database/Transcript.pm index fc15f079f..f46ac9b09 100644 --- a/modules/Bio/EnsEMBL/VEP/Haplo/AnnotationSource/Database/Transcript.pm +++ b/modules/Bio/EnsEMBL/VEP/Haplo/AnnotationSource/Database/Transcript.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/Haplo/AnnotationSource/File/GFF.pm b/modules/Bio/EnsEMBL/VEP/Haplo/AnnotationSource/File/GFF.pm index ac56fc5d4..64750ce0a 100644 --- a/modules/Bio/EnsEMBL/VEP/Haplo/AnnotationSource/File/GFF.pm +++ b/modules/Bio/EnsEMBL/VEP/Haplo/AnnotationSource/File/GFF.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/Haplo/AnnotationSource/File/GTF.pm b/modules/Bio/EnsEMBL/VEP/Haplo/AnnotationSource/File/GTF.pm index 0dee8ba5a..74a914a39 100644 --- a/modules/Bio/EnsEMBL/VEP/Haplo/AnnotationSource/File/GTF.pm +++ b/modules/Bio/EnsEMBL/VEP/Haplo/AnnotationSource/File/GTF.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/Haplo/AnnotationType/Transcript.pm b/modules/Bio/EnsEMBL/VEP/Haplo/AnnotationType/Transcript.pm index e526d24ae..74b756278 100644 --- a/modules/Bio/EnsEMBL/VEP/Haplo/AnnotationType/Transcript.pm +++ b/modules/Bio/EnsEMBL/VEP/Haplo/AnnotationType/Transcript.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/Haplo/InputBuffer.pm b/modules/Bio/EnsEMBL/VEP/Haplo/InputBuffer.pm index 77b6a79d9..809f3d14c 100644 --- a/modules/Bio/EnsEMBL/VEP/Haplo/InputBuffer.pm +++ b/modules/Bio/EnsEMBL/VEP/Haplo/InputBuffer.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/Haplo/Parser/VCF.pm b/modules/Bio/EnsEMBL/VEP/Haplo/Parser/VCF.pm index a09b1865b..fdc601c3d 100644 --- a/modules/Bio/EnsEMBL/VEP/Haplo/Parser/VCF.pm +++ b/modules/Bio/EnsEMBL/VEP/Haplo/Parser/VCF.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/Haplo/Runner.pm b/modules/Bio/EnsEMBL/VEP/Haplo/Runner.pm index d9f52ac65..9246e7f18 100644 --- a/modules/Bio/EnsEMBL/VEP/Haplo/Runner.pm +++ b/modules/Bio/EnsEMBL/VEP/Haplo/Runner.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/InputBuffer.pm b/modules/Bio/EnsEMBL/VEP/InputBuffer.pm index 6b6acd868..617cc35b0 100644 --- a/modules/Bio/EnsEMBL/VEP/InputBuffer.pm +++ b/modules/Bio/EnsEMBL/VEP/InputBuffer.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/OutputFactory.pm b/modules/Bio/EnsEMBL/VEP/OutputFactory.pm index 3cefd3526..818f6c65c 100755 --- a/modules/Bio/EnsEMBL/VEP/OutputFactory.pm +++ b/modules/Bio/EnsEMBL/VEP/OutputFactory.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/OutputFactory/BaseTab.pm b/modules/Bio/EnsEMBL/VEP/OutputFactory/BaseTab.pm index 8e583ec29..20c8b33b8 100644 --- a/modules/Bio/EnsEMBL/VEP/OutputFactory/BaseTab.pm +++ b/modules/Bio/EnsEMBL/VEP/OutputFactory/BaseTab.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/OutputFactory/JSON.pm b/modules/Bio/EnsEMBL/VEP/OutputFactory/JSON.pm index ead3e25c8..3cfd74803 100755 --- a/modules/Bio/EnsEMBL/VEP/OutputFactory/JSON.pm +++ b/modules/Bio/EnsEMBL/VEP/OutputFactory/JSON.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/OutputFactory/Tab.pm b/modules/Bio/EnsEMBL/VEP/OutputFactory/Tab.pm index 81e6453e2..2ff9f4342 100644 --- a/modules/Bio/EnsEMBL/VEP/OutputFactory/Tab.pm +++ b/modules/Bio/EnsEMBL/VEP/OutputFactory/Tab.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/OutputFactory/VCF.pm b/modules/Bio/EnsEMBL/VEP/OutputFactory/VCF.pm index 4864ec746..f4b425b65 100755 --- a/modules/Bio/EnsEMBL/VEP/OutputFactory/VCF.pm +++ b/modules/Bio/EnsEMBL/VEP/OutputFactory/VCF.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/OutputFactory/VEP_output.pm b/modules/Bio/EnsEMBL/VEP/OutputFactory/VEP_output.pm index 69d6fda3b..f1f3e1cd2 100644 --- a/modules/Bio/EnsEMBL/VEP/OutputFactory/VEP_output.pm +++ b/modules/Bio/EnsEMBL/VEP/OutputFactory/VEP_output.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/Parser.pm b/modules/Bio/EnsEMBL/VEP/Parser.pm index fdc308234..b328db8d5 100755 --- a/modules/Bio/EnsEMBL/VEP/Parser.pm +++ b/modules/Bio/EnsEMBL/VEP/Parser.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/Parser/CAID.pm b/modules/Bio/EnsEMBL/VEP/Parser/CAID.pm index e051880a1..7c1f96b85 100755 --- a/modules/Bio/EnsEMBL/VEP/Parser/CAID.pm +++ b/modules/Bio/EnsEMBL/VEP/Parser/CAID.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/Parser/HGVS.pm b/modules/Bio/EnsEMBL/VEP/Parser/HGVS.pm index dedde26d7..eca238d9b 100644 --- a/modules/Bio/EnsEMBL/VEP/Parser/HGVS.pm +++ b/modules/Bio/EnsEMBL/VEP/Parser/HGVS.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/Parser/ID.pm b/modules/Bio/EnsEMBL/VEP/Parser/ID.pm index 3d0221e16..f2988d9eb 100644 --- a/modules/Bio/EnsEMBL/VEP/Parser/ID.pm +++ b/modules/Bio/EnsEMBL/VEP/Parser/ID.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/Parser/Region.pm b/modules/Bio/EnsEMBL/VEP/Parser/Region.pm index 4540b14e6..64002977f 100644 --- a/modules/Bio/EnsEMBL/VEP/Parser/Region.pm +++ b/modules/Bio/EnsEMBL/VEP/Parser/Region.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/Parser/SPDI.pm b/modules/Bio/EnsEMBL/VEP/Parser/SPDI.pm index a314f58fb..1a42b9d5b 100644 --- a/modules/Bio/EnsEMBL/VEP/Parser/SPDI.pm +++ b/modules/Bio/EnsEMBL/VEP/Parser/SPDI.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/Parser/VCF.pm b/modules/Bio/EnsEMBL/VEP/Parser/VCF.pm index f4ca5217f..8cebd55e8 100644 --- a/modules/Bio/EnsEMBL/VEP/Parser/VCF.pm +++ b/modules/Bio/EnsEMBL/VEP/Parser/VCF.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/Parser/VEP_input.pm b/modules/Bio/EnsEMBL/VEP/Parser/VEP_input.pm index 708df0e95..a86d9628d 100644 --- a/modules/Bio/EnsEMBL/VEP/Parser/VEP_input.pm +++ b/modules/Bio/EnsEMBL/VEP/Parser/VEP_input.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/BaseVEP.pm b/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/BaseVEP.pm index 81ece42d3..3f1fccebb 100644 --- a/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/BaseVEP.pm +++ b/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/BaseVEP.pm @@ -1,7 +1,7 @@ =head1 LICENSE Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/CreateDumpJobs.pm b/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/CreateDumpJobs.pm index 1f891c8f0..83594eefa 100644 --- a/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/CreateDumpJobs.pm +++ b/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/CreateDumpJobs.pm @@ -1,7 +1,7 @@ =head1 LICENSE Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/DistributeDumps.pm b/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/DistributeDumps.pm index 47171dff2..490420939 100644 --- a/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/DistributeDumps.pm +++ b/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/DistributeDumps.pm @@ -1,7 +1,7 @@ =head1 LICENSE Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/DumpVEP_conf.pm b/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/DumpVEP_conf.pm index 9675a2a29..d2ba6954c 100644 --- a/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/DumpVEP_conf.pm +++ b/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/DumpVEP_conf.pm @@ -1,7 +1,7 @@ =head1 LICENSE Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/Dumper.pm b/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/Dumper.pm index cd09a58c4..358f30bd7 100644 --- a/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/Dumper.pm +++ b/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/Dumper.pm @@ -1,7 +1,7 @@ =head1 LICENSE Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/Dumper/Core.pm b/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/Dumper/Core.pm index 37bb021bc..172dfc48c 100644 --- a/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/Dumper/Core.pm +++ b/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/Dumper/Core.pm @@ -1,7 +1,7 @@ =head1 LICENSE Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/Dumper/Otherfeatures.pm b/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/Dumper/Otherfeatures.pm index fbac3fa25..18316f80c 100644 --- a/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/Dumper/Otherfeatures.pm +++ b/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/Dumper/Otherfeatures.pm @@ -1,7 +1,7 @@ =head1 LICENSE Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/Dumper/Regulation.pm b/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/Dumper/Regulation.pm index ed37a87f8..506b102da 100644 --- a/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/Dumper/Regulation.pm +++ b/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/Dumper/Regulation.pm @@ -1,7 +1,7 @@ =head1 LICENSE Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/Dumper/Variation.pm b/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/Dumper/Variation.pm index 3178c1439..eec199fbd 100644 --- a/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/Dumper/Variation.pm +++ b/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/Dumper/Variation.pm @@ -1,7 +1,7 @@ =head1 LICENSE Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/FinishDump.pm b/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/FinishDump.pm index 8631df1c9..ccaaa29bb 100644 --- a/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/FinishDump.pm +++ b/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/FinishDump.pm @@ -1,7 +1,7 @@ =head1 LICENSE Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/InitDump.pm b/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/InitDump.pm index 2e8d4053c..e8aadc2f1 100644 --- a/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/InitDump.pm +++ b/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/InitDump.pm @@ -1,7 +1,7 @@ =head1 LICENSE Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/JoinVEP.pm b/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/JoinVEP.pm index 3002554a3..50019c47a 100644 --- a/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/JoinVEP.pm +++ b/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/JoinVEP.pm @@ -1,7 +1,7 @@ =head1 LICENSE Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/MergeVEP.pm b/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/MergeVEP.pm index 2e8624060..6f7a9b181 100644 --- a/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/MergeVEP.pm +++ b/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/MergeVEP.pm @@ -1,7 +1,7 @@ =head1 LICENSE Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/QCDump.pm b/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/QCDump.pm index da6bade49..b5a537051 100644 --- a/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/QCDump.pm +++ b/modules/Bio/EnsEMBL/VEP/Pipeline/DumpVEP/QCDump.pm @@ -1,7 +1,7 @@ =head1 LICENSE Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/Runner.pm b/modules/Bio/EnsEMBL/VEP/Runner.pm index 2316ffcf5..f01ccb407 100644 --- a/modules/Bio/EnsEMBL/VEP/Runner.pm +++ b/modules/Bio/EnsEMBL/VEP/Runner.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/Stats.pm b/modules/Bio/EnsEMBL/VEP/Stats.pm index 0705115a2..3d986d44d 100644 --- a/modules/Bio/EnsEMBL/VEP/Stats.pm +++ b/modules/Bio/EnsEMBL/VEP/Stats.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/TranscriptTree.pm b/modules/Bio/EnsEMBL/VEP/TranscriptTree.pm index 4421c2d25..f2cd64a86 100644 --- a/modules/Bio/EnsEMBL/VEP/TranscriptTree.pm +++ b/modules/Bio/EnsEMBL/VEP/TranscriptTree.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/Utils.pm b/modules/Bio/EnsEMBL/VEP/Utils.pm index c099e3c5a..8c878773e 100644 --- a/modules/Bio/EnsEMBL/VEP/Utils.pm +++ b/modules/Bio/EnsEMBL/VEP/Utils.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/modules/Bio/EnsEMBL/VEP/VariantRecoder.pm b/modules/Bio/EnsEMBL/VEP/VariantRecoder.pm index cfeb894cf..fcf8aed4e 100755 --- a/modules/Bio/EnsEMBL/VEP/VariantRecoder.pm +++ b/modules/Bio/EnsEMBL/VEP/VariantRecoder.pm @@ -1,6 +1,6 @@ =head1 LICENSE -Copyright [2016-2023] EMBL-European Bioinformatics Institute +Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/t/AnnotationSource.t b/t/AnnotationSource.t index 3d01f3d44..9f7a9f61d 100644 --- a/t/AnnotationSource.t +++ b/t/AnnotationSource.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/AnnotationSourceAdaptor.t b/t/AnnotationSourceAdaptor.t index 345026641..ce47c1892 100644 --- a/t/AnnotationSourceAdaptor.t +++ b/t/AnnotationSourceAdaptor.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/AnnotationSource_Cache.t b/t/AnnotationSource_Cache.t index d3a7d2c8f..8d2680a31 100644 --- a/t/AnnotationSource_Cache.t +++ b/t/AnnotationSource_Cache.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/AnnotationSource_Cache_RegFeat.t b/t/AnnotationSource_Cache_RegFeat.t index 6ad3d024f..80790ef32 100644 --- a/t/AnnotationSource_Cache_RegFeat.t +++ b/t/AnnotationSource_Cache_RegFeat.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/AnnotationSource_Cache_Transcript.t b/t/AnnotationSource_Cache_Transcript.t index 35752230c..ca715f2da 100644 --- a/t/AnnotationSource_Cache_Transcript.t +++ b/t/AnnotationSource_Cache_Transcript.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/AnnotationSource_Cache_Variation.t b/t/AnnotationSource_Cache_Variation.t index c5d84929e..86a43b695 100644 --- a/t/AnnotationSource_Cache_Variation.t +++ b/t/AnnotationSource_Cache_Variation.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/AnnotationSource_Cache_VariationTabix.t b/t/AnnotationSource_Cache_VariationTabix.t index 356435c48..b3a44b55e 100644 --- a/t/AnnotationSource_Cache_VariationTabix.t +++ b/t/AnnotationSource_Cache_VariationTabix.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/AnnotationSource_Database_RegFeat.t b/t/AnnotationSource_Database_RegFeat.t index 2cf1e1056..d882a3a94 100644 --- a/t/AnnotationSource_Database_RegFeat.t +++ b/t/AnnotationSource_Database_RegFeat.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/AnnotationSource_Database_StructuralVariation.t b/t/AnnotationSource_Database_StructuralVariation.t index e77407da4..29ea6fc92 100644 --- a/t/AnnotationSource_Database_StructuralVariation.t +++ b/t/AnnotationSource_Database_StructuralVariation.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/AnnotationSource_Database_Transcript.t b/t/AnnotationSource_Database_Transcript.t index 52bfc06e7..45f8c660c 100644 --- a/t/AnnotationSource_Database_Transcript.t +++ b/t/AnnotationSource_Database_Transcript.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/AnnotationSource_Database_Variation.t b/t/AnnotationSource_Database_Variation.t index 3bf6577c7..037b59307 100644 --- a/t/AnnotationSource_Database_Variation.t +++ b/t/AnnotationSource_Database_Variation.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/AnnotationSource_File.t b/t/AnnotationSource_File.t index b1e31f4d8..3d794b6b7 100644 --- a/t/AnnotationSource_File.t +++ b/t/AnnotationSource_File.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/AnnotationSource_File_BED.t b/t/AnnotationSource_File_BED.t index fc8b0ee81..0d420a319 100644 --- a/t/AnnotationSource_File_BED.t +++ b/t/AnnotationSource_File_BED.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/AnnotationSource_File_BigWig.t b/t/AnnotationSource_File_BigWig.t index 1c9b1f1a0..2b6e5f097 100644 --- a/t/AnnotationSource_File_BigWig.t +++ b/t/AnnotationSource_File_BigWig.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/AnnotationSource_File_GFF.t b/t/AnnotationSource_File_GFF.t index 68c97fc0b..11c216948 100644 --- a/t/AnnotationSource_File_GFF.t +++ b/t/AnnotationSource_File_GFF.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/AnnotationSource_File_GTF.t b/t/AnnotationSource_File_GTF.t index ba01165e3..e20dd83e6 100644 --- a/t/AnnotationSource_File_GTF.t +++ b/t/AnnotationSource_File_GTF.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/AnnotationSource_File_VCF.t b/t/AnnotationSource_File_VCF.t index 4f6f0a635..4e44c7065 100644 --- a/t/AnnotationSource_File_VCF.t +++ b/t/AnnotationSource_File_VCF.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/BaseVEP.t b/t/BaseVEP.t index ad017520b..2ec61e619 100644 --- a/t/BaseVEP.t +++ b/t/BaseVEP.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/CacheDir.t b/t/CacheDir.t index 0c6ed7a28..b92e16813 100644 --- a/t/CacheDir.t +++ b/t/CacheDir.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/Config.t b/t/Config.t index 9bcefc66d..dfc5b29b8 100644 --- a/t/Config.t +++ b/t/Config.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/FilterSet.t b/t/FilterSet.t index 99d66827c..57b6cf307 100644 --- a/t/FilterSet.t +++ b/t/FilterSet.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/Haplo_AnnotationSource_Cache_Transcript.t b/t/Haplo_AnnotationSource_Cache_Transcript.t index 861f3304a..26450e251 100644 --- a/t/Haplo_AnnotationSource_Cache_Transcript.t +++ b/t/Haplo_AnnotationSource_Cache_Transcript.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/Haplo_AnnotationSource_Database_Transcript.t b/t/Haplo_AnnotationSource_Database_Transcript.t index 94a084301..ad21a72b9 100644 --- a/t/Haplo_AnnotationSource_Database_Transcript.t +++ b/t/Haplo_AnnotationSource_Database_Transcript.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/Haplo_AnnotationSource_File_GFF.t b/t/Haplo_AnnotationSource_File_GFF.t index 6cf6a4a00..eabadd8e4 100644 --- a/t/Haplo_AnnotationSource_File_GFF.t +++ b/t/Haplo_AnnotationSource_File_GFF.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/Haplo_AnnotationSource_File_GTF.t b/t/Haplo_AnnotationSource_File_GTF.t index ae241eac9..5f0a0969d 100644 --- a/t/Haplo_AnnotationSource_File_GTF.t +++ b/t/Haplo_AnnotationSource_File_GTF.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/Haplo_InputBuffer.t b/t/Haplo_InputBuffer.t index 0f3b4d8b0..19110c878 100644 --- a/t/Haplo_InputBuffer.t +++ b/t/Haplo_InputBuffer.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/Haplo_Parser_VCF.t b/t/Haplo_Parser_VCF.t index 4e8373eb8..88cb0bc54 100644 --- a/t/Haplo_Parser_VCF.t +++ b/t/Haplo_Parser_VCF.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/Haplo_Runner.t b/t/Haplo_Runner.t index 34488e311..f2ba24440 100644 --- a/t/Haplo_Runner.t +++ b/t/Haplo_Runner.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/InputBuffer.t b/t/InputBuffer.t index 63b0a162a..8deb36850 100644 --- a/t/InputBuffer.t +++ b/t/InputBuffer.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/OutputFactory.t b/t/OutputFactory.t index 3dd0dc113..6397556ed 100644 --- a/t/OutputFactory.t +++ b/t/OutputFactory.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/OutputFactory_JSON.t b/t/OutputFactory_JSON.t index 05ad338ef..cdbfb6a81 100755 --- a/t/OutputFactory_JSON.t +++ b/t/OutputFactory_JSON.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/OutputFactory_Tab.t b/t/OutputFactory_Tab.t index 644ed484e..d503a7668 100644 --- a/t/OutputFactory_Tab.t +++ b/t/OutputFactory_Tab.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/OutputFactory_VCF.t b/t/OutputFactory_VCF.t index 6cc8fb813..02acb4dce 100644 --- a/t/OutputFactory_VCF.t +++ b/t/OutputFactory_VCF.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/OutputFactory_VEP_output.t b/t/OutputFactory_VEP_output.t index f74a73609..098c9bd4b 100644 --- a/t/OutputFactory_VEP_output.t +++ b/t/OutputFactory_VEP_output.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/Parser.t b/t/Parser.t index 68a8e3223..bea22866c 100644 --- a/t/Parser.t +++ b/t/Parser.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/Parser_CAID.t b/t/Parser_CAID.t index 16915774b..564c26197 100755 --- a/t/Parser_CAID.t +++ b/t/Parser_CAID.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/Parser_HGVS.t b/t/Parser_HGVS.t index f49e1624a..2f7dc5dd1 100644 --- a/t/Parser_HGVS.t +++ b/t/Parser_HGVS.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/Parser_ID.t b/t/Parser_ID.t index 99046c636..d23a115b2 100644 --- a/t/Parser_ID.t +++ b/t/Parser_ID.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/Parser_Region.t b/t/Parser_Region.t index 4e0406791..3efcdde05 100644 --- a/t/Parser_Region.t +++ b/t/Parser_Region.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/Parser_SPDI.t b/t/Parser_SPDI.t index 4e07a4e44..7bad72dcc 100644 --- a/t/Parser_SPDI.t +++ b/t/Parser_SPDI.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/Parser_VCF.t b/t/Parser_VCF.t index 0db8be28c..8c85691f8 100755 --- a/t/Parser_VCF.t +++ b/t/Parser_VCF.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/Parser_VEP_input.t b/t/Parser_VEP_input.t index 6822261ca..1a9ed6bfa 100644 --- a/t/Parser_VEP_input.t +++ b/t/Parser_VEP_input.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/Runner.t b/t/Runner.t index 05c2e1bbd..853bc3575 100755 --- a/t/Runner.t +++ b/t/Runner.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/Stats.t b/t/Stats.t index ddbbc0180..ecc1edf00 100644 --- a/t/Stats.t +++ b/t/Stats.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/TranscriptTree.t b/t/TranscriptTree.t index cdd73a7ed..7b5efae71 100644 --- a/t/TranscriptTree.t +++ b/t/TranscriptTree.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/Utils.t b/t/Utils.t index 09f4fd39b..412236d65 100644 --- a/t/Utils.t +++ b/t/Utils.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/VEPTestingConfig.pm b/t/VEPTestingConfig.pm index f519f6bd9..6a336895b 100644 --- a/t/VEPTestingConfig.pm +++ b/t/VEPTestingConfig.pm @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/VariantRecoder.t b/t/VariantRecoder.t index 4728224db..424294a45 100755 --- a/t/VariantRecoder.t +++ b/t/VariantRecoder.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/bam_edit.t b/t/bam_edit.t index 38fbc9dd1..c3606db6e 100644 --- a/t/bam_edit.t +++ b/t/bam_edit.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/t/version.t b/t/version.t index c468763b4..2808925e3 100644 --- a/t/version.t +++ b/t/version.t @@ -1,4 +1,4 @@ -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/validator/vep_input_format_validator.py b/validator/vep_input_format_validator.py index 8a317f0e3..842b222aa 100644 --- a/validator/vep_input_format_validator.py +++ b/validator/vep_input_format_validator.py @@ -1,6 +1,6 @@ """ Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute - Copyright [2016-2023] EMBL-European Bioinformatics Institute + Copyright [2016-2024] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at diff --git a/variant_recoder b/variant_recoder index 62572baa0..f639b7b06 100755 --- a/variant_recoder +++ b/variant_recoder @@ -1,5 +1,5 @@ #!/usr/bin/env perl -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/vep b/vep index 4dc09f160..781bca2d0 100755 --- a/vep +++ b/vep @@ -1,5 +1,5 @@ #!/usr/bin/env perl -# Copyright [2016-2023] EMBL-European Bioinformatics Institute +# Copyright [2016-2024] EMBL-European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License.