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Add shift_hgvs flag as an option to REST API (vep/:species/hgvs/:hgvs_notation) #663

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Karthik-Tempus opened this issue Sep 17, 2024 · 3 comments

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@Karthik-Tempus
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Karthik-Tempus commented Sep 17, 2024

In some scenarios, it is useful to be able not 3' shift the hgvs notations. So, it would great to be able to untoggle shift_hgvs.

@sgiorgetti
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Thanks for the heads up @Karthik-Tempus .
I shall pass your suggestion on to the Variation team, who are responsible for the VEP.

@sgiorgetti
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Hello again @Karthik-Tempus - happy to confirm the Variation team have decided to implement the changes you asked for. The request has been added to their backlog.
I am not sure when exactly - Ensembl 114 vs 115 - it is going to be published though.

Leaving the issue open, should you want to reach out to us again on this topic.

@Karthik-Tempus
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Karthik-Tempus commented Sep 18, 2024

Thank you, hope that means it will be added to both GRCh38 and GRCh37 versions of the VEP REST API.

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