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Edited python build file for version 0.1.0
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dist/pore2chip-0.1.0.tar.gz

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examples/example_1_50x50_to_model.ipynb

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{
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"data": {
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"text/plain": [
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"<matplotlib.image.AxesImage at 0x2399d3fd4f0>"
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"<matplotlib.image.AxesImage at 0x13a4d468a90>"
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]
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},
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"execution_count": 2,
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{
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"data": {
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"application/vnd.jupyter.widget-view+json": {
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"model_id": "24fc3b81177c41e4892f05bbab4bc92a",
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"model_id": "d4a9eab4b4ed4e759ada0c58cb42a6ed",
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"version_major": 2,
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"version_minor": 0
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},

examples/example_6_flow_2d_numerical_on_XCT.ipynb

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pyproject.toml

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[project]
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name = "pore2chip"
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version = "0.0.8"
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version = "0.1.0"
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authors = [
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{ name="Aramy Truong", email="aramy.truong@pnnl.gov" },
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{ name="Maruti Mudunuru", email="maruti@pnnl.gov" },
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{ name="Anil Krishna Battu", email="anilkrishna.battu@pnnl.gov" },
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{ name="Satish Karra", email="karra@pnnl.gov" },
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]
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description = "A package that takes XCT images of porous materials and generates representative micromodels"
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description = "A package that takes 3D images of porous materials and generates representative micromodels"
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readme = "README.md"
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requires-python = ">=3.8"
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requires-python = ">=3.9"
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classifiers = [
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"Programming Language :: Python :: 3",
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dependencies = {file = ["requirements.txt"]}
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[project.urls]
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Homepage = "https://github.com/aramyxt/Pore2Chip"
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Homepage = "https://github.com/EMSL-Computing/Pore2Chip"

src/pore2chip.egg-info/PKG-INFO

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Metadata-Version: 2.1
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Name: pore2chip
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Version: 0.0.8
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Summary: A package that takes XCT images of porous materials and generates representative micromodels
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Version: 0.1.0
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Summary: A package that takes 3D images of porous materials and generates representative micromodels
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Author-email: Aramy Truong <aramy.truong@pnnl.gov>, Maruti Mudunuru <maruti@pnnl.gov>, Erin Rooney <erin.rooney@usda.gov>, Arunima Bhattacharjee <arunimab@pnnl.gov>, Tamas Varga <tamas.varga@pnnl.gov>, Lal Mamud <lal.mamud@pnnl.gov>, "Xiaoliang (Bryan) He" <xiaoliang.he@pnnl.gov>, Anil Krishna Battu <anilkrishna.battu@pnnl.gov>, Satish Karra <karra@pnnl.gov>
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Project-URL: Homepage, https://github.com/aramyxt/Pore2Chip
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Project-URL: Homepage, https://github.com/EMSL-Computing/Pore2Chip
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Classifier: Programming Language :: Python :: 3
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Classifier: Operating System :: OS Independent
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Requires-Python: >=3.8
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Requires-Python: >=3.9
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Description-Content-Type: text/markdown
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License-File: LICENSE.md
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Requires-Dist: drawsvg
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**Conclusion:** The iterative ModEx loop continuously improves multi-physics process models through integration with experimental data, leading to more accurate predictions for soil carbon cycling and rhizosphere function applications.
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![ModExLoop](https://github.com/aramyxt/XCT_to_Micromodel/blob/main/example_outputs/ModEx_Loop_SoilChip.jpg)
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![ModExLoop](https://github.com/EMSL-Computing/XCT_to_Micromodel/blob/main/example_outputs/ModEx_Loop_SoilChip.jpg)
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## Capability summary: What the Pore2Chip module can do?
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* Extract pore sizes and pore throat sizes
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```
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Install from source:
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```
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git clone https://github.com/aramyxt/Pore2Chip.git
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git clone https://github.com/EMSL-Computing/Pore2Chip.git
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cd Pore2Chip
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python3 -m build
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python3 -m pip install pore2chip --no-index --find-links dist/
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```
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...or alternatively:
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```
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git clone https://github.com/aramyxt/Pore2Chip.git
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git clone https://github.com/EMSL-Computing/Pore2Chip.git
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python3 pip install -e ./Pore2Chip
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```
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Building a Docker Image with Jupyter Notebook:
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```
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git clone https://github.com/aramyxt/Pore2Chip.git
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git clone https://github.com/EMSL-Computing/Pore2Chip.git
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cd Pore2Chip
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docker build -t pore2chip
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docker run -p 8888:8888 pore2chip
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* Example-7: 2D Steady-State Flow on XCT image with Physics-informed Neural Network (PINN)
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## Authors
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* Aramy Truong (lead-developer), EMSL (<aramy.truong@pnnl.gov>)
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* Maruti Mudunuru (co-developer), PNNL (<maruti@pnnl.gov>)
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* Aramy Truong (lead developer), EMSL (<aramy.truong@pnnl.gov>)
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* Maruti Mudunuru (co-lead developer), PNNL (<maruti@pnnl.gov>)
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* Erin Rooney, USDA (<erin.rooney@usda.gov>)
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* Arunima Bhattacharjee, EMSL (<arunimab@pnnl.gov>)
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* Tamas Varga, EMSL (<tamas.varga@pnnl.gov>)
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* Lal Mamud (co-developer), PNNL (<lal.mamud@pnnl.gov>)
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* Lal Mamud (developer), PNNL (<lal.mamud@pnnl.gov>)
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* Xiaoliang (Bryan) He, PNNL (<xiaoliang.he@pnnl.gov>)
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* Anil Krishna Battu, EMSL (<anilkrishna.battu@pnnl.gov>)
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* Satish Karra, EMSL (<karra@pnnl.gov>)

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