Using DESeq2 Bioconductor package, we performed differential expression analysis (DEA) to identify differential expressed genes (DEGs) in plasma and leukocyte samples from GSE157103 dataset and differentially expressed miRNAs (DEMs) in lung cancer cell lines from GSE148729 dataset.
If you use this work, or any of the associated code/materials, in your own research or publication, please cite our paper:
Samy, A., Maher, M.A., Abdelsalam, N.A. et al. SARS-CoV-2 potential drugs, drug targets, and biomarkers: a viral-host interaction network-based analysis. Sci Rep 12, 11934 (2022). https://doi.org/10.1038/s41598-022-15898-w