Read SQL Server

[JNygaard-Skylight]

PULL REQUEST

Summary

If using SQL Server as the metadata database, the eCR Table can now read from it.

Related Issue

Fixes #2946

Acceptance Criteria

• Modify listEcrData service to retrieve the necessary metadata from SQL Server to populate the eCR Library table (from ecr_data, ecr_rr_conditions, ecr_rr_rule_summaries) (the same way it does for Postgres)
  • Add logic to select the correct db source (Postgres or SQL Server) based on the env var MEATADATA_DATABASE_TYPE
• Add tests

Additional Information

You will need the following variables in your .env.local:

METADATA_DATABASE_TYPE=sqlserver
METADATA_DATABASE_SCHEMA=extended
SQL_SERVER_USER=sa
SQL_SERVER_PASSWORD=Password1!
SQL_SERVER_HOST=sqlserver # Use this for running the seed data script and when you are running the ecr-viewer in a container
# SQL_SERVER_HOST=localhost # Use this for running the ecr-viewer locally

Also to run the seed data script with SQL Server you will need to change the Orchestration config to use the philly_ecr.json message-parser configuation. E.g.:

    {
      "name": "metadata_values",
      "service": "message_parser",
      "endpoint": "/parse_message",
      "params": {
        "message_format": "fhir",
        "parsing_schema_name": "philly_ecr.json"
      }
    },

Checklist

• If this code affects the other scrum team, have they been notified? (In Slack, as reviewers, etc.)

[austin-hall-skylight]

As it is currently, we are only matching on whole words for first and last name.

Suggested change

	return `${field} LIKE '${searchTerm}'`;
	return `${field} LIKE '%${searchTerm}%'`;

[austin-hall-skylight]

Can we get some tests here that hit the sqlserver code path? Everything being tested here is for postgres.

[austin-hall-skylight]

I was able to get the metadata to save correctly by adding "include_metadata": "true" to the params in the suggested orchestration config changes:

    {
      "name": "metadata_values",
      "service": "message_parser",
      "endpoint": "/parse_message",
      "params": {
        "message_format": "fhir",
        "parsing_schema_name": "philly_ecr.json",
        "include_metadata": "true"
      }
    },