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index.qmd
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---
toc: false
format:
html:
include-in-header: hero-image.html
include-after-body: _footer.html
sidebar: false
anchor-sections: false
css: [theme.css, index.css]
---
```{r}
#| include: false
# To change the hero-image:
# open theme.css
# find the .hero-image section
```
```{r}
#| include: false
library(htmltools)
source("R/functions.R")
```
# Welcome to ALA Labs
This site is a resource for coding projects that use data sourced from [the ALA](https://ala.org.au/). We hope that users will find interesting content, whether their focus is ecological modelling, data visualisation, or simply investigating the natural world through a digital lens. Enjoy!
<br>
***
:::{.column-screen}
:::{.column-screen-inset}
:::{.home-column-image .col-right}
<a href="https://labs.ala.org.au/lens">
![](images/homepage/lens-bubble-image.png){.home-img-lens}
</a>
:::
:::{.home-column-text .col-left}
<center>
<a href="https://labs.ala.org.au/lens">
<h1 class="heading-home">ALA <img src="images/logos/lens-logo.svg" class="lens-logo"></img> Lens</h1>
</a>
<span>Dive into data using a [new interactive interface](https://labs.ala.org.au/lens) for exploring ALA data. Try out new views of the ALA, designed to encourage exploration and discovery of species, data and place.</span><br>
[Designed by [Mitchell Whitelaw](https://mtchl.net/) and [Adrian Mackenzie](https://researchportalplus.anu.edu.au/en/persons/adrian-mackenzie) of the [Australian National University (ANU)](https://www.anu.edu.au/)]{style="font-face:italic;"}<br>
<span style="font-size:.7rem; color:#a7abb4;">Images (all CC-BY-NC): Kai Squires, andrewpavlov, mikegrow, kerrbrad, Matt Campbell, Toby Esplin, darcywhittaker</span>
</center>
:::
:::
:::
:::{.column-screen style="background-color:#B8573E;"}
:::{.column-screen-inset}
:::{.home-column-image .col-left}
<a href="https://labs.ala.org.au/posts/">
![](images/homepage/home_ala-plots.png){.home-img}
</a>
:::
:::{.home-column-text .col-right}
<center> <h1 class="heading-home" style="color: #fff;">Posts</h1>
<span style = "color: #fff; font-style: italic">How-to articles for solving scientific problems</span>
</center>
```{r, echo = FALSE}
tags$div(class = "category-row",
tags$div(
class = "category-column",
tags$a(href = "posts/index.html#category=Summaries",
tags$img(
href = "posts/index.html#category=Summaries",
src = "images/vectors/barplot.svg",
style = "color:#fff !important;",
class = "category-image honey-white"
)),
tags$h4(style = "text-align:center;",
tags$a(
class = "white",
href = "posts/index.html#category=Summaries", "Summaries"))),
tags$div(
class = "category-column",
tags$a(href = "posts/index.html#category=Maps",
tags$img(
href = "posts/index.html#category=Maps",
src = "images/vectors/Australia.svg",
style = "color:#fff !important;",
class = "category-image honey-white"
)),
tags$h4(style = "text-align:center",
tags$a(
class = "white",
href = "posts/index.html#category=Maps", "Maps"))),
tags$div(
class = "category-column",
tags$a(href = "posts/index.html#category:Trees",
tags$img(
href = "posts/index.html#category=Trees",
src = "images/vectors/tree.svg",
style = "color:#fff !important;",
class = "category-image honey-white"
)),
tags$h4(style = "text-align:center",
tags$a(
class = "white",
href = "posts/index.html#category=Trees", "Trees")))
)
```
:::
:::
:::
:::{.column-screen}
:::{.column-screen-inset}
:::{.home-column-image .col-right}
<a href="https://labs.ala.org.au/research/highlights/">
![](images/homepage/home_ala-research.png){.home-img}
</a>
:::
:::{.home-column-text .col-left}
<center> <h1 class="heading-home">Research</h1>
<span style = "font-style: italic">Highlighting research supported by ALA data</span>
</center>
```{r, echo = FALSE}
tags$div(class = "category-row",
tags$div(
class = "category-column",
style = "width: 50%",
tags$a(href = "research/highlights/index.html",
tags$img(
href = "research/highlights/index.html",
src = "images/vectors/seedling-solid.svg",
class = "category-image honey"
)),
tags$h4(style = "text-align:center;",
tags$a(href = "research/highlights/index.html", "Selected\nhighlights"))),
tags$div(
class = "category-column",
style = "width: 50%",
tags$a(href = "research/citations/index.html",
tags$img(
href = "research/citations/index.html",
src = "images/vectors/table-list-solid.svg",
class = "category-image honey"
)),
tags$h4(style = "text-align:center;",
tags$a(href = "research/citations/index.html", "Complete list"))
))
```
:::
:::
:::
:::{.column-screen style="background-color:#B8573E;"}
:::{.column-screen-inset}
:::{.home-column-image .col-left}
<a href="https://labs.ala.org.au/software/index.html">
![](images/homepage/home_ala-software-c.png){.home-img-transparent}
</a>
<!-- :::{.hexBadges} -->
<!-- <a href="https://labs.ala.org.au/software.html"> -->
<!-- <img src = "https://raw.githubusercontent.com/AtlasOfLivingAustralia/ala-labs/science-impact-testing/images/hex/galah_logo.png" class = "r1 c0"></img> -->
<!-- </a> -->
<!-- <a href="https://labs.ala.org.au/software.html"> -->
<!-- <img src = "https://raw.githubusercontent.com/AtlasOfLivingAustralia/ala-labs/science-impact-testing/images/hex/potions-logo.png" class = "r2 c1" style = "width:265px;"></img> -->
<!-- </a> -->
<!-- ::: -->
:::
:::{.home-column-text .col-right}
<center> <h1 class="heading-home" style="color: #fff;">Software</h1>
<span style = "font-style: italic; color: #fff;">Tools supported by the Science & Decision Support Team</span>
</center>
```{r, echo = FALSE}
tags$div(class = "category-row",
tags$div(
class = "category-column",
style = "width: 100%",
tags$a(href = "software/index.html",
tags$img(
href = "software/index.html",
src = "images/vectors/hexagon-vector.svg",
style = "color:#fff !important;",
class = "category-image honey-white"
)),
tags$h4(style = "text-align:center;",
tags$a(
class = "white",
href = "software/index.html", "Packages"))
))
```
:::
:::
:::
:::{.column-screen style="background-color:#ffffff;"}
:::{.column-screen-inset}
:::{.home-column-image .col-left}
<center> <h1 class="heading-home" style="color: #222322;">Books</h1>
<span style = "font-style: italic;">Long-form resources by the Science & Decision Support Team</span>
</center>
```{r, echo = FALSE}
tags$div(class = "category-row",
tags$div(
class = "category-column",
style = "width: 100%",
tags$a(href = "books/index.html",
tags$img(
href = "books/index.html",
src = "images/vectors/book-solid.svg",
class = "category-image honey"
)),
tags$h4(style = "text-align:center;",
tags$a(
href = "books/index.html", "Books"))
))
```
:::
:::{.home-column-text .col-right}
<center>
<a href="https://labs.ala.org.au/books/index.html">
![](books/images/covers/cleaner-shrimp_cover.png){.home-img-transparent width=45% style="border-radius:2%;"}
</a>
</center>
:::
:::
:::
***
:::{.column-screen style="background-color:#fff;"}
:::{.column-page}
<center> <h1>{{< fa earth-oceania >}} We value</h1> </center>
:::
:::{.column-screen}
```{r, echo = FALSE}
# find icons at https://fontawesome.com/v5.15/icons?d=gallery&p=2
tags$div(class = "values-row",
create_values_box1(
value = "\ Openness",
icon = "fas fa-book-open",
text = "Data are most useful when they are widely available and easy to use. We try to encourage the sharing of tools that make data from the Atlas of Living Australia more open and useful for everyone"
),
create_values_box2(
value = "\ Scientific transparency",
icon = "fas fa-dna",
text = "Transparency is necessary for reproducible science. We encourage that decisions, methods and deviations are clear and transparent in a workflow from the planning phase, to the retrieval and analysis of data, to the final output"
),
create_values_box3(
value = "\ Robust methods",
icon = "far fa-chart-bar",
text = "No method or analytic procedure is perfect. We value consideration for strengths and limitations of each method or analysis. This attitude helps researchers choose methods that provide robust results for their specific question"
)
)
```
:::
:::