diff --git a/src/dolomite_sce/save_single_cell_experiment.py b/src/dolomite_sce/save_single_cell_experiment.py index 17658e0..4ce0f35 100644 --- a/src/dolomite_sce/save_single_cell_experiment.py +++ b/src/dolomite_sce/save_single_cell_experiment.py @@ -119,9 +119,6 @@ def save_single_cell_experiment( # save alt expts. _alt_names = x.get_alternative_experiment_names() - print(_alt_names) - print(x) - print(x.get_alternative_experiments()) if len(_alt_names) > 0: _alt_path = os.path.join(path, "alternative_experiments") os.mkdir(_alt_path) @@ -130,9 +127,7 @@ def save_single_cell_experiment( json.dump(_alt_names, handle) for _aidx, _aname in enumerate(_alt_names): - print(_aidx, _aname) _alt_save_path = os.path.join(_alt_path, str(_aidx)) - print(x.alternative_experiment(_aname)) try: dl.save_object( x.alternative_experiment(_aname), diff --git a/tests/test_stage_single_cell_experiment.py b/tests/test_stage_single_cell_experiment.py index 7f6dbd0..804ad50 100644 --- a/tests/test_stage_single_cell_experiment.py +++ b/tests/test_stage_single_cell_experiment.py @@ -102,8 +102,6 @@ def test_stage_sce_with_rdims_and_alts(): save_object(se, dir) roundtrip = read_object(dir) - - print(se.reduced_dim("tsnooch"), roundtrip.reduced_dim("tsnooch")) assert isinstance(roundtrip, SingleCellExperiment) assert numpy.allclose(se.row_data["foo"], roundtrip.row_data["foo"]) assert numpy.allclose(se.column_data["stuff"], roundtrip.column_data["stuff"]) @@ -154,9 +152,6 @@ def test_empty_dimnames(): ), ) - print(se.row_data) - print(se.get_row_data()) - dir = os.path.join(mkdtemp(), "sce_dimdata3") save_object(se, dir)