diff --git a/.github/workflows/ammr-doc.yaml b/.github/workflows/ammr-doc.yaml index 5e79f5d3b..8be4c4e2f 100644 --- a/.github/workflows/ammr-doc.yaml +++ b/.github/workflows/ammr-doc.yaml @@ -28,17 +28,17 @@ jobs: cache-write: ${{ github.event_name == 'push' && github.ref_name == 'master' }} - name: Link check + shell: pixi run -e docs bash {0} run: | cd Docs - pixi run -e docs \ - sphinx-build -M linkcheck . _build -W --keep-going -a -q + sphinx-build -M linkcheck . _build -W --keep-going -a -q - name: Build Documentation + shell: pixi run -e docs bash {0} run: | cd Docs - pixi run -e docs clean - pixi run -e docs \ - sphinx-build -M html . _build -W --keep-going -a -t draft + rm -rf _build + sphinx-build -M html . _build -W --keep-going -a -t draft - uses: actions/upload-artifact@v4 with: @@ -61,31 +61,16 @@ jobs: git checkout $(git describe --tags `git rev-list --tags=ammr* --max-count=1`); - uses: prefix-dev/setup-pixi@v0.5.1 - continue-on-error: true - id: pixisetup with: environments: docs cache-write: ${{ github.event_name == 'push' && github.ref_name == 'master' }} - name: Build Documentation - if: steps.pixisetup.outcome == 'success' + shell: pixi run -e docs bash {0} run: | cd Docs - pixi run -e docs \ - sphinx-build -M html . _build -a - - # Fall back to mamba when buildig old versions - - name: Install mamba - if: steps.pixisetup.outcome == 'failure' - uses: mamba-org/setup-micromamba@v1 - with: - environment-file: Docs/environment.yaml - - - name: build with mamba - if: steps.pixisetup.outcome == 'failure' - shell: bash -leo pipefail {0} {0} - run: sphinx-build -M html Docs Docs/_build -a - + sphinx-build -M html . _build -a + - uses: actions/upload-artifact@v4 with: name: tagged-version diff --git a/.github/workflows/nightly-tests.yml b/.github/workflows/nightly-tests.yml index ac83a3c4a..e1a28149b 100644 --- a/.github/workflows/nightly-tests.yml +++ b/.github/workflows/nightly-tests.yml @@ -3,7 +3,12 @@ name: Nightly Full AMMR tests on: schedule: - cron: 0 3 * * * - workflow_dispatch: {} + workflow_dispatch: + inputs: + force-update-durations: + type: boolean + description: 'Force creation of new .test-duration files and create a PR with them. Default is false.' + default: false concurrency: @@ -19,7 +24,6 @@ jobs: strategy: fail-fast: false matrix: - ams_version: ["8.0_Beta"] test_group: [1, 2, 3, 4, 5, 6, 7, 8, 9, 10] env: @@ -36,17 +40,18 @@ jobs: cache-write: ${{ github.event_name == 'push' && github.ref_name == 'master' }} - name: Run full AMMR tests - env: - RLM_LICENSE_PASSWORD: ${{ secrets.LICENSE_PASSWORD }} - RLM_LICENSE: ${{ secrets.LICENSE_SERVER }} run: | cd Tests - pixi run -e test ` - pytest -n auto --dist worksteal ` + pytest -n auto --dist worksteal ` --splits 10 --group ${{ matrix.test_group }} --splitting-algorithm=least_duration ` --durations=20 ` --store-durations --clean-durations ` --runslow + shell: pwsh -command "pixi run -e test pwsh '{0}'" + + env: + RLM_LICENSE_PASSWORD: ${{ secrets.LICENSE_PASSWORD }} + RLM_LICENSE: ${{ secrets.LICENSE_SERVER }} - name: Upload partial durations uses: actions/upload-artifact@v4 @@ -60,35 +65,38 @@ jobs: test-linux: if: github.repository == 'anybody/ammr' runs-on: ubuntu-latest - container: ghcr.io/anybody/anybodycon-github-actions:${{ matrix.ams_version }} + container: ghcr.io/anybody/anybodycon-github-actions:8.0 env: - ANYBODY_SUPPRESS_DEPRECATION_MESSAGES: ${{ fromJSON('{"7.4":"Off","7.5_Beta":"On"}')[matrix.ams_version] }} + ANYBODY_SUPPRESS_DEPRECATION_MESSAGES: "Off" strategy: fail-fast: false matrix: - ams_version: ["7.4", "8.0_Beta"] - test_group: [1, 2, 3, 4, 5] + test_group: [1, 2, 3, 4, 5, 6, 7, 8, 9, 10] steps: - uses: actions/checkout@v4 - with: - ref: ${{ fromJSON('{"7.4":"master-ammr-2.4.x","8.0_Beta":"master"}')[matrix.ams_version] }} - name: Set debug env vars run: echo ${{ github.event.inputs.debug_config }} >> $GITHUB_ENV + + - uses: prefix-dev/setup-pixi@v0.5.1 + with: + environments: test + cache-write: ${{ github.event_name == 'push' && github.ref_name == 'master' }} - name: Run tests + run: | + cd Tests + pytest -n auto \ + --splits 10 --group ${{ matrix.test_group }} --splitting-algorithm=least_duration \ + --only-load \ + --runslow + shell: pixi run -e test bash {0} env: RLM_LICENSE_PASSWORD: ${{ secrets.LICENSE_PASSWORD }} RLM_LICENSE: ${{ secrets.LICENSE_SERVER }} - run: | - cd Tests - pytest -n auto \ - --splits 5 --group ${{ matrix.test_group }} --splitting-algorithm=least_duration \ - --only-load \ - --runslow - + combine-and-upload-timings: runs-on: ubuntu-latest @@ -108,7 +116,7 @@ jobs: data.update(json.loads(file.read_text())) data = {k: v for k, v in sorted(data.items(), key=lambda x: x[1], reverse=True)} test_durations = pathlib.Path('Tests/.test_durations') - if set(data) != set(json.loads(test_durations.read_text())): + if set(data) != set(json.loads(test_durations.read_text())) or "${{ github.event.inputs.force-update-durations }}" == "true": test_durations.write_text(json.dumps(data, indent=2)) shell: python diff --git a/.github/workflows/test-forks.yml b/.github/workflows/test-forks.yml index d88750637..f2803f536 100644 --- a/.github/workflows/test-forks.yml +++ b/.github/workflows/test-forks.yml @@ -39,13 +39,14 @@ jobs: & $HOME/.pixi/bin/pixi.exe install - name: Run AMMR tests + shell: pixi run -e test pwsh -Command {0} + run: | cd Tests - pixi run -e test ` - pytest -n 5 --dist worksteal ` - --splits 10 --group ${{ matrix.test_group }} --splitting-algorithm=least_duration ` - --durations=10 ` - --runslow + pytest -n 5 --dist worksteal ` + --splits 10 --group ${{ matrix.test_group }} --splitting-algorithm=least_duration ` + --durations=10 ` + --runslow env: RLM_LICENSE: ${{ secrets.LICENSE_SERVER }} RLM_LICENSE_PASSWORD: ${{ secrets.LICENSE_PASSWORD }} diff --git a/.github/workflows/test-self-hosted.yml b/.github/workflows/test-self-hosted.yml index 2b0d71e25..120a1e405 100644 --- a/.github/workflows/test-self-hosted.yml +++ b/.github/workflows/test-self-hosted.yml @@ -55,10 +55,11 @@ jobs: connection-string: ${{ secrets.AZURE_CONN_STR }} - name: Run AMMR tests + shell: pixi run -e test pwsh -Command {0} + run: | cd Tests - pixi run -e test ` - pytest -n 5 --dist worksteal ` + pytest -n 5 --dist worksteal ` --splits 5 --group ${{ matrix.test_group }} --splitting-algorithm=least_duration ` --durations=10 ` --anybodycon="$Env:ANYBODYCON" ` diff --git a/.github/workflows/test.yml b/.github/workflows/test.yml index 7744ae9b2..a73212485 100644 --- a/.github/workflows/test.yml +++ b/.github/workflows/test.yml @@ -58,12 +58,13 @@ jobs: - name: Run AMMR tests run: | cd Tests - pixi run -e test ` - pytest -n auto --dist worksteal ` - --splits 20 --group ${{ matrix.test_group }} --splitting-algorithm=least_duration ` - --durations=10 ` - --runslow - ${{ github.event.inputs.custom-pytest-arg || '' }} + pytest -n auto --dist worksteal ` + --splits 20 --group ${{ matrix.test_group }} --splitting-algorithm=least_duration ` + --durations=10 ` + --runslow + ${{ github.event.inputs.custom-pytest-arg || '' }} + shell: pixi run -e test pwsh -Command {0} + env: RLM_LICENSE: ${{ secrets.LICENSE_SERVER }} RLM_LICENSE_PASSWORD: ${{ secrets.LICENSE_PASSWORD }} diff --git a/Docs/README.md b/Docs/README.md index a35420897..184064945 100644 --- a/Docs/README.md +++ b/Docs/README.md @@ -3,14 +3,13 @@ # AnyBody Managed Model Repository 4 ✨ Beta > The beta version of the AMMR 4 with a full thoracic model and new abdominal pressure model +> [!TIP] +> For the the latest AMMR 4 release, with full thoracic model please see [AMMR4-beta](https://github.com/anybody/ammr4-beta) + The AnyBody Model Repository (AMMR), is an open library of musculoskeletal models and examples for the [AnyBody Modeling System](https://www.anybodytech.com/software/ams/). -> [!IMPORTANT] -An AnyBody license with active maintenance is required to use the models from GitHub. -Please see the [beta program](https://forum.anyscript.org/t/become-a-beta-tester/5056/6), or request a [trial license ](https://www.anybodytech.com/contact/) -

@@ -30,6 +29,11 @@ institutions. The models are maintained by [AnyBody Technology](https://www.anybodytech.com) who ensure that various body part models can be used together as a full body, scalable musculoskeletal model. +> [!IMPORTANT] +An AnyBody license with active maintenance is required to use the models from GitHub. +Please see the [beta program](https://forum.anyscript.org/t/become-a-beta-tester/5056/6), or request a [trial license ](https://www.anybodytech.com/contact/) + + ## Getting Started diff --git a/Tests/.test_durations b/Tests/.test_durations index 7e36b2a64..4a7f0516d 100644 --- a/Tests/.test_durations +++ b/Tests/.test_durations @@ -1,316 +1,316 @@ { - "AnyMocap/Test_Plug-in-gait_simple_fullbody_ParamID.any::Test_Plug-in-gait_simple_fullbody_ParamID_0": 579.0112965999999, - "AnyMocap/Test_Plug-in-gait_Squat_StandigRef.any::Test_Plug-in-gait_Squat_StandigRef_0": 414.7407610000001, - "AnyMocap/Test_BVH_OptimizeOrigin.any::Test_BVH_OptimizeOrigin_2": 383.3422228, - 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8.013111299999991, + "BM combinations/test_bm_bodypart_lower.any::test_bm_bodypart_lower_11": 8.002607400000045, + "BM combinations/test_bm_leg_muscles.any::test_bm_leg_muscles_1": 7.9228789000000575, + "BM combinations/test_no_feet.any::test_no_feet_21": 7.874480300000073, + "BM combinations/test_no_feet.any::test_no_feet_13": 7.860328600000059, + "BM combinations/test_no_feet.any::test_no_feet_1": 7.8241358999999875, + "BM combinations/test_bm_bodypart_upper.any::test_bm_bodypart_upper_11": 7.71666330000005, + "BM combinations/test_bm_arm_muscles.any::test_bm_arm_muscles_0": 7.652064400000029, + "BM combinations/test_bm_leg_muscles.any::test_bm_leg_muscles_13": 7.5206558999999515, + "BM combinations/test_bm_bodypart.any::test_bm_bodypart_17": 7.512333899999987, + "BM combinations/test_bm_leg_muscles.any::test_bm_leg_muscles_22": 7.45579429999998, + "BM combinations/test_bm_leg_muscles.any::test_bm_leg_muscles_0": 7.451216799999997, + "BM combinations/test_bm_bodypart_upper.any::test_bm_bodypart_upper_5": 7.405992000000083, + "BM combinations/test_bm_bodypart_upper.any::test_bm_bodypart_upper_13": 7.37225490000003, + "BM combinations/test_bm_bodypart_lower.any::test_bm_bodypart_lower_9": 7.316033800000014, + "Applications/test_FreePostureFullBodyStatic.any::test_FreePostureFullBodyStatic_0": 7.276312500000017, + "BM combinations/test_bm_bodypart_lower.any::test_bm_bodypart_lower_6": 7.18977910000001, + "BM combinations/test_bm_arm_muscles.any::test_bm_arm_muscles_4": 7.139771599999904, + "BM combinations/test_bm_leg_muscles.any::test_bm_leg_muscles_21": 7.125435600000003, + "BM combinations/test_bm_bodypart.any::test_bm_bodypart_8": 7.10572569999988, + "BM combinations/test_bm_bodypart_lower.any::test_bm_bodypart_lower_0": 7.0732680999998365, + "BM combinations/test_bm_bodypart_lower.any::test_bm_bodypart_lower_1": 6.944798600000013, + "BM combinations/test_bm_bodypart_lower.any::test_bm_bodypart_lower_8": 6.828128399999969, + "Applications/test_KneeSimulator.any::test_KneeSimulator_0": 6.702829300000019, + "BM combinations/test_bm_bodypart.any::test_bm_bodypart_5": 6.645752100000095, + "BM combinations/test_bm_bodypart.any::test_bm_bodypart_26": 6.608700100000021, + "BM combinations/test_bm_bodypart.any::test_bm_bodypart_24": 6.606403199999988, + "BM combinations/test_bm_leg_muscles.any::test_bm_leg_muscles_20": 6.603682000000049, + "BM combinations/test_bm_bodypart.any::test_bm_bodypart_25": 6.574987899999996, + "BM combinations/test_bm_bodypart_lower.any::test_bm_bodypart_lower_4": 6.531968299999903, + "BM combinations/test_bm_bodypart_upper.any::test_bm_bodypart_upper_14": 6.499030300000015, + "BM combinations/test_bm_bodypart.any::test_bm_bodypart_6": 6.325211700000068, + "BM combinations/test_bm_bodypart_upper.any::test_bm_bodypart_upper_15": 6.234193599999912, + "AnyMocap/Test_ForcePlateAutoDetection.any::Test_ForcePlateAutoDetection_4": 6.046703400000013, + "BM combinations/test_bm_bodypart.any::test_bm_bodypart_18": 5.623476699999969, + "plugins/test_bmplugin.any::test_bmplugin_0": 5.277962100000082, + "BM combinations/test_bm_arm_muscles.any::test_bm_arm_muscles_3": 5.204456900000025, + "ModelUtilities/test_SupportReactions.any::test_SupportReactions_0": 5.146254399999918, + "test_calibration_lowerbody.any::test_calibration_lowerbody_4": 5.137939000000017, + "AnyMocap/Test_ForcePlateAutoDetection.any::Test_ForcePlateAutoDetection_7": 5.063500500000032, + "AnyMocap/Test_ForcePlateAutoDetection.any::Test_ForcePlateAutoDetection_10": 4.930171500000029, + "BM combinations/test_bm_bodypart.any::test_bm_bodypart_9": 4.269431200000042, + "BM combinations/test_bm_bodypart.any::test_bm_bodypart_1": 3.8006187999999383, + "BM combinations/test_bm_bodypart.any::test_bm_bodypart_10": 3.7690360000000283, + "Applications/test_KneeSimulator_load_only.any::test_KneeSimulator_load_only_1": 2.796924800000056, + "test_human_model_hash.any::test_human_model_hash_0": 1.4980374999999526, + "Applications/test_KneeSimulator_load_only.any::test_KneeSimulator_load_only_0": 0.9904908999999975, + "Applications/test_BikeModel.any::test_BikeModel_0": 0.9597957999998243, + "Applications/test_AalborgMandibleValidation.any::test_AalborgMandibleValidation_2": 0.9366333000000395, + "Applications/test_BikeModel2D.any::test_BikeModel2D_0": 0.8489991000000146, + "Applications/test_JumpingJack.any::test_JumpingJack_0": 0.7118557999999666, + "ModelUtilities/test_rhythmclass.any::test_rhythmclass_0": 0.6778257999999369, + "AnyMocap/Test_ForcePlateAutoDetection.any::Test_ForcePlateAutoDetection_8": 0.4501829000000157, + "AnyMocap/Test_ForcePlateAutoDetection.any::Test_ForcePlateAutoDetection_9": 0.4083599000000504, + "AnyMocap/Test_ForcePlateAutoDetection.any::Test_ForcePlateAutoDetection_2": 0.4052194999999301, + "AnyMocap/Test_ForcePlateAutoDetection.any::Test_ForcePlateAutoDetection_11": 0.40460790000003044, + "AnyMocap/Test_ForcePlateAutoDetection.any::Test_ForcePlateAutoDetection_5": 0.3733565999999655, + "BM combinations/test_bm_arm_muscles.any::test_bm_arm_muscles_1": 0.3720288999998047, + "test_compare.py::test_Pos": 0.0005653000000052089, + "test_compare.py::test_Base": 0.0005485999998882107, + "test_compare.py::test_Fout": 0.0005427000000963744, + "test_compare.py::test_Acc": 0.0005093999999417065, + "test_compare.py::test_Fin": 0.0005062000000179978, + "test_compare.py::test_Contact": 0.0005050999999411943, + "test_compare.py::test_Vel": 0.0005029000000149608, + "test_compare.py::test_Muscles": 0.00048680000008971547, + "test_compare.py::test_Activity": 0.00048670000001038716, + "test_compare.py::test_SelOut": 0.00044900000000325235 } \ No newline at end of file diff --git a/Tests/AnyMocap/Test_ADL_Gait_InversDynamics.any b/Tests/AnyMocap/Test_ADL_Gait_InversDynamics.any index 28cd97cf0..6bc5a04db 100644 --- a/Tests/AnyMocap/Test_ADL_Gait_InversDynamics.any +++ b/Tests/AnyMocap/Test_ADL_Gait_InversDynamics.any @@ -17,7 +17,6 @@ #path MOCAP_PATH_MAINFILE "/Main.any" #define MOCAP_NAME_MAINFILEDIR "2014001_C1_01" -//#define CREATE_IMAGE 1 // Run test with fewer timesteps #define N_STEP 40 diff --git a/Tests/AnyMocap/Test_Plug-in-gait_Squat_Flywheel.any b/Tests/AnyMocap/Test_Plug-in-gait_Squat_Flywheel.any index 3c710a654..fbd53a432 100644 --- a/Tests/AnyMocap/Test_Plug-in-gait_Squat_Flywheel.any +++ b/Tests/AnyMocap/Test_Plug-in-gait_Squat_Flywheel.any @@ -16,7 +16,7 @@ #define MOCAP_TEST_FILENAME_PREFIX "Test_" #ifndef TEST_NAME - #define CREATE_IMAGE + #endif diff --git a/Tests/AnyMocap/Test_Plug-in-gait_Squat_StandigRef.any b/Tests/AnyMocap/Test_Plug-in-gait_Squat_StandigRef.any index 08c1e06c2..d431868e9 100644 --- a/Tests/AnyMocap/Test_Plug-in-gait_Squat_StandigRef.any +++ b/Tests/AnyMocap/Test_Plug-in-gait_Squat_StandigRef.any @@ -9,7 +9,7 @@ #define MOCAP_NAME_MAINFILEDIR "S1_StandingRef" #ifndef TEST_NAME - //#define CREATE_IMAGE 1 + #endif #ifdef CREATE_IMAGE diff --git a/Tests/AnyMocap/Test_Plug-in-gait_simple_fullbody_InverseDynamics.any b/Tests/AnyMocap/Test_Plug-in-gait_simple_fullbody_InverseDynamics.any index 76d0df5ce..35e651bf5 100644 --- a/Tests/AnyMocap/Test_Plug-in-gait_simple_fullbody_InverseDynamics.any +++ b/Tests/AnyMocap/Test_Plug-in-gait_simple_fullbody_InverseDynamics.any @@ -15,7 +15,7 @@ #define N_STEP 40 #ifdef TEST_NAME -//#define CREATE_IMAGE + #endif diff --git a/Tests/AnyMocap/Test_Plug-in-gait_simple_lowerbody.any b/Tests/AnyMocap/Test_Plug-in-gait_simple_lowerbody.any index d83e92165..127531b7e 100644 --- a/Tests/AnyMocap/Test_Plug-in-gait_simple_lowerbody.any +++ b/Tests/AnyMocap/Test_Plug-in-gait_simple_lowerbody.any @@ -22,9 +22,9 @@ #else #define MOCAP_TEST_FILENAME_PREFIX "GUI_" #define BM_LEG_MODEL _LEG_MODEL_TLEM2_ -#define CREATE_IMAGE #endif + #ifdef CREATE_IMAGE #undef MOCAP_TEST_FILENAME_PREFIX #define MOCAP_TEST_FILENAME_PREFIX "LowerExtremity_" diff --git a/Tests/AnyMocap/Test_force_plate_offset.any b/Tests/AnyMocap/Test_force_plate_offset.any index da08aa299..e087c227c 100644 --- a/Tests/AnyMocap/Test_force_plate_offset.any +++ b/Tests/AnyMocap/Test_force_plate_offset.any @@ -17,7 +17,7 @@ #define MOCAP_NAME_MAINFILEDIR "SpecialFeatures" #ifndef TEST_NAME -#define CREATE_IMAGE + #endif #path TEMP_PATH "Output" diff --git a/Tests/Applications/test_AalborgMandibleValidation.any b/Tests/Applications/test_AalborgMandibleValidation.any index b582131ec..c1c2618e3 100644 --- a/Tests/Applications/test_AalborgMandibleValidation.any +++ b/Tests/Applications/test_AalborgMandibleValidation.any @@ -9,7 +9,7 @@ #ifndef TEST_NAME #define MODELTYPE 1 -#define CREATE_IMAGE 1 + #define TEST_NAME "test_AalborgMandibleValidation_0" #endif diff --git a/Tests/Applications/test_AirlinePassenger.any b/Tests/Applications/test_AirlinePassenger.any index 79b5ef3f9..896294088 100644 --- a/Tests/Applications/test_AirlinePassenger.any +++ b/Tests/Applications/test_AirlinePassenger.any @@ -3,7 +3,7 @@ #include "../libdef.any" #ifndef TEST_NAME -#define CREATE_IMAGE 1 + #endif diff --git a/Tests/Applications/test_CrossTrainer.any b/Tests/Applications/test_CrossTrainer.any index 29a32a004..b6bd7fa09 100644 --- a/Tests/Applications/test_CrossTrainer.any +++ b/Tests/Applications/test_CrossTrainer.any @@ -6,7 +6,7 @@ #ifndef TEST_NAME -#define CREATE_IMAGE 1 + #endif diff --git a/Tests/Applications/test_EvaluateJointStrength.any b/Tests/Applications/test_EvaluateJointStrength.any index 520acdc15..d961bf977 100644 --- a/Tests/Applications/test_EvaluateJointStrength.any +++ b/Tests/Applications/test_EvaluateJointStrength.any @@ -28,7 +28,7 @@ #define BM_ARM_RIGHT 1 #define TEST_NAME "test_EvaluateJointStrength.any_0" -// #define CREATE_IMAGE 0 +// #define BM_TRUNK_MUSCLES OFF #endif diff --git a/Tests/Applications/test_ExoConceptTrunk_BoxLift.any b/Tests/Applications/test_ExoConceptTrunk_BoxLift.any index 9dca4e741..6ff674d0a 100644 --- a/Tests/Applications/test_ExoConceptTrunk_BoxLift.any +++ b/Tests/Applications/test_ExoConceptTrunk_BoxLift.any @@ -7,7 +7,7 @@ #define MOCAP_TEST_FILENAME_PREFIX TEST_NAME + "_" #else #define MOCAP_TEST_FILENAME_PREFIX "GUI1_" -#define CREATE_IMAGE + #endif diff --git a/Tests/Applications/test_ExoConcept_BoxLift.any b/Tests/Applications/test_ExoConcept_BoxLift.any index ba39a9870..8fc778b05 100644 --- a/Tests/Applications/test_ExoConcept_BoxLift.any +++ b/Tests/Applications/test_ExoConcept_BoxLift.any @@ -13,7 +13,7 @@ #define MOCAP_TEST_FILENAME_PREFIX TEST_NAME + "_" #else #define MOCAP_TEST_FILENAME_PREFIX "GUI1_" -#define CREATE_IMAGE + #endif diff --git a/Tests/Applications/test_FemoralTorsion.any b/Tests/Applications/test_FemoralTorsion.any index 2b5a0e4bf..da9f1af1a 100644 --- a/Tests/Applications/test_FemoralTorsion.any +++ b/Tests/Applications/test_FemoralTorsion.any @@ -10,7 +10,6 @@ #include "../libdef.any" #ifndef TEST_NAME - #define CREATE_IMAGE #endif diff --git a/Tests/Applications/test_KneeForceExample.any b/Tests/Applications/test_KneeForceExample.any index f1b904312..342c6b920 100644 --- a/Tests/Applications/test_KneeForceExample.any +++ b/Tests/Applications/test_KneeForceExample.any @@ -4,7 +4,7 @@ #include "../../Application/Examples/KneeForcesExample/Knee_force_example.main.any" #ifndef TEST_NAME -#define CREATE_IMAGE + #endif diff --git a/Tests/Applications/test_KneeSimulator.any b/Tests/Applications/test_KneeSimulator.any index aa205392c..a6c78e2bc 100644 --- a/Tests/Applications/test_KneeSimulator.any +++ b/Tests/Applications/test_KneeSimulator.any @@ -15,7 +15,7 @@ #include "../../Application/Examples/KneeSimulator/Main.any" #ifndef TEST_NAME -#define CREATE_IMAGE + #endif diff --git a/Tests/Applications/test_PedalDemo.any b/Tests/Applications/test_PedalDemo.any index 1504f738b..68e449818 100644 --- a/Tests/Applications/test_PedalDemo.any +++ b/Tests/Applications/test_PedalDemo.any @@ -4,7 +4,7 @@ #include "../../Application/Examples/PedalDemo/PedalDemo.Main.any" #ifndef TEST_NAME -#define CREATE_IMAGE 1 + #define TEST_NAME "test_PedalDemo_0" #endif diff --git a/Tests/Applications/test_SpineFixationWithForceDependentKinematics.any b/Tests/Applications/test_SpineFixationWithForceDependentKinematics.any index 7d227c98c..79569a338 100644 --- a/Tests/Applications/test_SpineFixationWithForceDependentKinematics.any +++ b/Tests/Applications/test_SpineFixationWithForceDependentKinematics.any @@ -12,7 +12,7 @@ Main = }; #ifndef TEST_NAME -#define CREATE_IMAGE + #endif diff --git a/Tests/Applications/test_SpinePressureSeatingRelaxed.any b/Tests/Applications/test_SpinePressureSeatingRelaxed.any index b45ce1dc8..4bee50d5b 100644 --- a/Tests/Applications/test_SpinePressureSeatingRelaxed.any +++ b/Tests/Applications/test_SpinePressureSeatingRelaxed.any @@ -8,7 +8,7 @@ #include "../tools.any" #ifndef TEST_NAME -//#define CREATE_IMAGE +// #endif Main = diff --git a/Tests/Applications/test_StandingModel.any b/Tests/Applications/test_StandingModel.any index 72b69089d..a464875ca 100644 --- a/Tests/Applications/test_StandingModel.any +++ b/Tests/Applications/test_StandingModel.any @@ -3,7 +3,7 @@ #include "../libdef.any" #ifndef TEST_NAME - #define CREATE_IMAGE + #endif diff --git a/Tests/Applications/test_StandingPosturePredictionModel.any b/Tests/Applications/test_StandingPosturePredictionModel.any index 497ba3f77..182d856da 100644 --- a/Tests/Applications/test_StandingPosturePredictionModel.any +++ b/Tests/Applications/test_StandingPosturePredictionModel.any @@ -5,7 +5,7 @@ #ifndef TEST_NAME - #define CREATE_IMAGE 1 + #endif diff --git a/Tests/Applications/test_THA-KneeBendDemo.any b/Tests/Applications/test_THA-KneeBendDemo.any index 35d2fa018..5782f4e44 100644 --- a/Tests/Applications/test_THA-KneeBendDemo.any +++ b/Tests/Applications/test_THA-KneeBendDemo.any @@ -11,7 +11,7 @@ #include "../libdef.any" #ifndef TEST_NAME -#define CREATE_IMAGE 1 + #endif diff --git a/pixi.lock b/pixi.lock index 629028656..05e9053bf 100644 --- a/pixi.lock +++ b/pixi.lock @@ -8,11 +8,11 @@ environments: linux-64: - conda: https://conda.anaconda.org/conda-forge/linux-64/_libgcc_mutex-0.1-conda_forge.tar.bz2 - conda: https://conda.anaconda.org/conda-forge/linux-64/_openmp_mutex-4.5-2_gnu.tar.bz2 - - conda: https://conda.anaconda.org/conda-forge/linux-64/anypytools-1.11.2-py311h38be061_0.conda + - conda: https://conda.anaconda.org/conda-forge/linux-64/anypytools-1.11.4-py312h7900ff3_0.conda - conda: https://conda.anaconda.org/conda-forge/linux-64/bzip2-1.0.8-hd590300_5.conda - conda: https://conda.anaconda.org/conda-forge/linux-64/c-ares-1.26.0-hd590300_0.conda - conda: https://conda.anaconda.org/conda-forge/linux-64/ca-certificates-2023.11.17-hbcca054_0.conda - - conda: https://conda.anaconda.org/conda-forge/linux-64/h5py-3.10.0-nompi_py311hebc2b07_101.conda + - conda: https://conda.anaconda.org/conda-forge/linux-64/h5py-3.10.0-nompi_py312h1b477d7_101.conda - conda: https://conda.anaconda.org/conda-forge/linux-64/hdf5-1.14.3-nompi_h4f84152_100.conda - conda: https://conda.anaconda.org/conda-forge/linux-64/keyutils-1.6.1-h166bdaf_0.tar.bz2 - conda: https://conda.anaconda.org/conda-forge/linux-64/krb5-1.21.2-h659d440_0.conda @@ -37,16 +37,15 @@ environments: - conda: https://conda.anaconda.org/conda-forge/linux-64/libssh2-1.11.0-h0841786_0.conda - conda: https://conda.anaconda.org/conda-forge/linux-64/libstdcxx-ng-13.2.0-h7e041cc_4.conda - conda: https://conda.anaconda.org/conda-forge/linux-64/libuuid-2.38.1-h0b41bf4_0.conda - - conda: https://conda.anaconda.org/conda-forge/linux-64/libxcrypt-4.4.36-hd590300_1.conda - conda: https://conda.anaconda.org/conda-forge/linux-64/libzlib-1.2.13-hd590300_5.conda - - conda: https://conda.anaconda.org/conda-forge/linux-64/markupsafe-2.1.4-py311h459d7ec_0.conda + - conda: https://conda.anaconda.org/conda-forge/linux-64/markupsafe-2.1.5-py312h98912ed_0.conda - conda: https://conda.anaconda.org/conda-forge/linux-64/ncurses-6.4-h59595ed_2.conda - - conda: https://conda.anaconda.org/conda-forge/linux-64/numpy-1.26.3-py311h64a7726_0.conda + - conda: https://conda.anaconda.org/conda-forge/linux-64/numpy-1.26.4-py312heda63a1_0.conda - conda: https://conda.anaconda.org/conda-forge/linux-64/openssl-3.2.1-hd590300_0.conda - - conda: https://conda.anaconda.org/conda-forge/linux-64/python-3.11.7-hab00c5b_1_cpython.conda - - conda: https://conda.anaconda.org/conda-forge/linux-64/python_abi-3.11-4_cp311.conda + - conda: https://conda.anaconda.org/conda-forge/linux-64/python-3.12.0-hab00c5b_0_cpython.conda + - conda: https://conda.anaconda.org/conda-forge/linux-64/python_abi-3.12-4_cp312.conda - conda: https://conda.anaconda.org/conda-forge/linux-64/readline-8.2-h8228510_1.conda - - conda: 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libcblas >=3.9.0,<4.0a0 @@ -3941,14 +4126,14 @@ packages: - libgfortran5 >=12.3.0 - liblapack >=3.9.0,<4.0a0 - libstdcxx-ng >=12 - - numpy >=1.23.5,<1.28 - - numpy >=1.23.5,<2.0a0 - - python >=3.11,<3.12.0a0 - - python_abi 3.11.* *_cp311 + - numpy >=1.26.3,<1.28 + - numpy >=1.26.3,<2.0a0 + - python >=3.12,<3.13.0a0 + - python_abi 3.12.* *_cp312 license: BSD-3-Clause license_family: BSD - size: 17270207 - timestamp: 1706042776987 + size: 17083471 + timestamp: 1706042601027 - kind: conda name: setuptools version: 69.0.3 diff --git a/pixi.toml b/pixi.toml index 201ee3543..b13ebb7d4 100644 --- a/pixi.toml +++ b/pixi.toml @@ -5,14 +5,15 @@ channels = ["conda-forge", "anybody"] platforms = ["linux-64", "win-64"] [dependencies] -python="3.11.*" -jinja2 = ">=3.1.3,<3.2" -[tasks] -bmconfig = {cmd = "python render_templates.py", cwd = "Body/AAUHuman/BuildTools"} + +[feature.base.dependencies] +python="3.12.0,<3.13" +jinja2 = ">=3.1.3,<3.2" [feature.anybody80.dependencies] +python = "3.12.0,<3.13" anypytools="*" nomkl = "*" @@ -25,7 +26,7 @@ update-mocap-files = {cmd = "python recreate_mocap_intermediate_files.py", cwd = [feature.test.dependencies] -pytest = "*" +pytest = ">=8.0.0,<8.1.0" pytest-split = "*" pytest-xdist = "*" azure-storage-blob = "12.19.0.*" @@ -56,9 +57,11 @@ tqdm = ">=4.66.1,<4.67" html = {cmd = "sphinx-build -M html . _build -W --keep-going", cwd = "Docs"} linkcheck = {cmd = "sphinx-build -M linkcheck . _build -W --keep-going -a -q ", cwd = "Docs"} clean = {cmd = "rm -rf _build", cwd = "Docs"} +bmconfig = {cmd = "python render_templates.py", cwd = "Body/AAUHuman/BuildTools"} [environments] -anybodycon = ["anybody80"] -test = ["test", "anybody80"] +default = ["base"] +anybodycon = ["anybody80", "base"] +test = ["test", "anybody80", "base"] docs = ["docs"]