DESCRIPTION

Package: pagoda2
Title: Single Cell Analysis and Differential Expression
Version: 0.1.0
Authors@R: c(person("Peter", "Kharchenko", email = "peter_kharchenko@hms.harvard.edu", role = c("aut", "cre")), 
             person("Nikolas","Barkas", email="nikolas_barkas@hms.harvard.edu", role="aut"),
             person("Viktor", "Petukhov", email="viktor.s.petuhov@ya.ru", role="ctb"))
Description: Single-cell RNA-seq Analysis
Depends: R (>= 3.2.1), Matrix, igraph
License: GPL-3 
Encoding: UTF-8
LazyData: true
Imports:
    AnnotationDbi,
    BiocGenerics,
    base64enc,
    dendsort,
    igraph,
    irlba,
    MASS,
    magrittr,
    Matrix,
    mgcv,
    parallel,
    plyr,
    Rcpp,
    RcppArmadillo,
    RcppProgress,
    rjson,
    RMTstat,
    Rook,
    Rtsne,
    urltools,
    stats,
    utils,
    fastcluster
Suggests:
    dbscan,
    ggplot2,
    GO.db,
    pcaMethods,
    pheatmap,
    rgl,
    robustbase,
    org.Dr.eg.db,
    org.Hs.eg.db,
    org.Mm.eg.db,
    knitr, 
    rmarkdown
Remotes:
  bioc::3.3/AnnotationDbi,
  bioc::3.3/BiocGenerics,
  bioc::3.3/org.Dr.eg.db,
  bioc::3.3/org.Hs.eg.db,
  bioc::3.3/org.Mm.eg.db,
  bioc::3.3/pcaMethods
VignetteBuilder: knitr
RoxygenNote: 6.1.1
LinkingTo: Rcpp, RcppArmadillo, RcppProgress, RcppEigen
NeedsCompilation: yes